RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CD180Q99467 661 aa4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 SLC6A7Q99884 636 aa4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 PDCD1LG2Q9BQ51 273 aa4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 SYT3Q9BQG1 590 aa4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 MENTQ9BUN1 341 aa4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 CST11Q9H112 138 aa4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 OR52D1Q9H346 318 aa4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 TCEAL2Q9H3H9 227 aaPredicted RBP4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 SEPSECSQ9HD40 501 aaKnown RBP4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 CBLN4Q9NTU7 201 aa4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 LUZP4Q9P127 313 aa4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 IL36AQ9UHA7 158 aa4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 ICAM5Q9UMF0 924 aa4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 VSIG4Q9Y279 399 aa4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 STRAPQ9Y3F4 350 aaKnown RBP4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 TIMM13Q9Y5L4 95 aaPredicted RBP4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 LCTP09848 1927 aa4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 THSD7BQ9C0I4 1608 aa4.28□□□□□ -1.72
SNRNP40-206ENST00000489853 PDE4DIPQ5VU43 2346 aa4.28□□□□□ -1.73
SNRNP40-206ENST00000489853 TGIF2-C20orf24A0A0A6YYL0 155 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 A0A0D9SEW6 157 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 KIR2DL5BA0A0G2JN68 375 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 KIR2DL5BA0A0G2JPC4 375 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TSPAN11A1L157 253 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 C20orf202A1L168 122 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 MEIS3P1A6NDR6 274 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 MSGN1A6NI15 193 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 CPSF4LA6NMK7 179 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 A6NNC1 897 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 H3BQ15 152 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 K7ESF4 209 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 M0QYG6 137 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 PEX12O00623 359 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SMAD9O15198 467 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 PLRG1O43660 514 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 CDC40O60508 579 aaKnown RBP eCLIP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 RAMP1O60894 148 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 ALOX12BO75342 701 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 CA11O75493 328 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 IL33O95760 270 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SNAI1O95863 264 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TBX6O95947 436 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 CYB5AP00167 134 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TGFB1P01137 390 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 IL6RP08887 468 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SEC11BP0C7V7 166 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 PET100P0DJ07 73 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 OR5H8P0DN80 308 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 OR13C7P0DN81 318 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 IL9P15248 144 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 PNLIPP16233 465 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 ADRA2CP18825 462 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 CXCR1P25024 350 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 BRS3P32247 399 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 FRKP42685 505 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 KHKP50053 298 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TAS2R31P59538 309 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 ERVFRD-1P60508 538 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 UBE2KP61086 200 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SELENOTP62341 195 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 LMAN2Q12907 356 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 Q499Y3 187 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 MIDNQ504T8 468 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 HIKESHIQ53FT3 197 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 COL5A1-AS1Q5SY13 56 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC25A24Q6NUK1 477 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 RPUSD3Q6P087 351 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 AGTRAPQ6RW13 159 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 OPN5Q6U736 354 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC39A5Q6ZMH5 540 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC25A26Q70HW3 274 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 GDF7Q7Z4P5 450 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 GALNTL5Q7Z4T8 443 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM150AQ86TG1 271 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TMPRSS12Q86WS5 348 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF101Q8IZC7 436 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 KIR2DL5AQ8N109 375 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 KDM8Q8N371 416 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF615Q8N8J6 731 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 NUDT10Q8NFP7 164 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 OR5T1Q8NG75 326 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 OR5K2Q8NHB8 316 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 MFSD8Q8NHS3 518 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 OIT3Q8WWZ8 545 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 METTL21AQ8WXB1 218 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 CORO2AQ92828 525 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 EXTL1Q92935 676 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 WDR34Q96EX3 536 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 CNN2Q99439 309 aaKnown RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 ARV1Q9H2C2 271 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 Q9N2J8 555 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TXNRD2Q9NNW7 524 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 DNAJC4Q9NNZ3 241 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 PDE7BQ9NP56 450 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 RAB18Q9NP72 206 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 DMRT3Q9NQL9 472 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 GPR27Q9NS67 375 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SIRT3Q9NTG7 399 aaPredicted RBP4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM242Q9NWH2 141 aa4.27□□□□□ -1.73
SNRNP40-206ENST00000489853 SIDT1Q9NXL6 827 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms