RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 HTR1AP08908 422 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 SSTR2P30874 369 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 GLRXP35754 106 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 PPP1CBP62140 327 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 TLE4Q04727 773 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 MRPL28Q13084 256 aaKnown RBP12.13□□□□□ -0.47
NUP188-207ENST00000487952 ZNF684Q5T5D7 378 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 OR2G6Q5TZ20 316 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 RGS7BPQ6MZT1 257 aaPredicted RBP12.13□□□□□ -0.47
NUP188-207ENST00000487952 RFPL4BQ6ZWI9 263 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 ZNF101Q8IZC7 436 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 SVOPQ8N4V2 548 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 NUP37Q8NFH4 326 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 SPRYD4Q8WW59 207 aaPredicted RBP12.13□□□□□ -0.47
NUP188-207ENST00000487952 SGCDQ92629 289 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 AKAP1Q92667 903 aaKnown RBP eCLIP12.13□□□□□ -0.47
NUP188-207ENST00000487952 MARVELD3Q96A59 401 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 C14orf79Q96F83 325 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 MND1Q9BWT6 205 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 CDCA4Q9BXL8 241 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 PTTG3PQ9NZH4 202 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 CLEC2DQ9UHP7 191 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 CMAHPQ9Y471 501 aa12.13□□□□□ -0.47
NUP188-207ENST00000487952 ADGRG4Q8IZF6 3080 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 GPRIN2O60269 458 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 ICMTO60725 284 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 CTAG2O75638 210 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 NGFP01138 241 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 ADRA2AP08913 450 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 TUBG1P23258 451 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 GCH1P30793 250 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 PSMB10P40306 273 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 MMP16P51512 607 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 WNT4P56705 351 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 SELENOVP59797 346 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 TIGD6Q17RP2 521 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 GFOD2Q3B7J2 385 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 ZNF718Q3SXZ3 478 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 ZNF672Q499Z4 452 aaPredicted RBP12.12□□□□□ -0.47
NUP188-207ENST00000487952 SPATA46Q5T0L3 261 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 BCL2L15Q5TBC7 163 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 RNLSQ5VYX0 342 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 NAA40Q86UY6 237 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 KLBQ86Z14 1044 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 OR52H1Q8NGJ2 320 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 SLC25A40Q8TBP6 338 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 NEUROG1Q92886 237 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 PELI1Q96FA3 418 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 SIGLEC11Q96RL6 698 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 ZNF649Q9BS31 505 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 PBOV1Q9GZY1 135 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 CLEC4MQ9H2X3 399 aaPredicted RBP12.12□□□□□ -0.47
NUP188-207ENST00000487952 ZNF442Q9H7R0 627 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 ISG20L2Q9H9L3 353 aaKnown RBP12.12□□□□□ -0.47
NUP188-207ENST00000487952 UBTD1Q9HAC8 227 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 TUBG2Q9NRH3 451 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 CA10Q9NS85 328 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 FAM206AQ9NX38 181 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 CISD1Q9NZ45 108 aaKnown RBP12.12□□□□□ -0.47
NUP188-207ENST00000487952 STARD10Q9Y365 291 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 COL12A1Q99715 3063 aa12.12□□□□□ -0.47
NUP188-207ENST00000487952 HEATR1Q9H583 2144 aaKnown RBP12.11□□□□□ -0.47
NUP188-207ENST00000487952 RTTNQ86VV8 2226 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 ABCA4P78363 2273 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 HS3ST1O14792 307 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 XRCC2O43543 280 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 CFL1P23528 166 aaKnown RBP12.11□□□□□ -0.47
NUP188-207ENST00000487952 THBS4P35443 961 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 FABP6P51161 128 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 CDH15P55291 814 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 TAS2R43P59537 309 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 NKX6-1P78426 367 aaPredicted RBP12.11□□□□□ -0.47
NUP188-207ENST00000487952 MFGE8Q08431 387 aaPredicted RBP12.11□□□□□ -0.47
NUP188-207ENST00000487952 SNAI3Q3KNW1 292 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 HIST2H2BCQ6DN03 193 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 COLCA1Q6ZS62 124 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 MRPL21Q7Z2W9 205 aaKnown RBP12.11□□□□□ -0.47
NUP188-207ENST00000487952 COMMD2Q86X83 199 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 FBXL14Q8N1E6 418 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 NANOGP1Q8N7R0 232 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 OR8B12Q8NGG6 310 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 GATAD2BQ8WXI9 593 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 RORBQ92753 470 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 FBXW5Q969U6 566 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 NR1H4Q96RI1 486 aaPredicted RBP12.11□□□□□ -0.47
NUP188-207ENST00000487952 DHRS9Q9BPW9 319 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 TRIM36Q9NQ86 728 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 BABAM2Q9NXR7 383 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 NUFIP1Q9UHK0 495 aaKnown RBP12.11□□□□□ -0.47
NUP188-207ENST00000487952 OR52A1Q9UKL2 312 aa12.11□□□□□ -0.47
NUP188-207ENST00000487952 PTPN13Q12923 2485 aa12.1□□□□□ -0.47
NUP188-207ENST00000487952 FAM221AA4D161 298 aa12.1□□□□□ -0.47
NUP188-207ENST00000487952 E7EQL1 145 aa12.1□□□□□ -0.47
NUP188-207ENST00000487952 H3BSA7 217 aa12.1□□□□□ -0.47
NUP188-207ENST00000487952 ERVS71-1P61550 626 aa12.1□□□□□ -0.47
NUP188-207ENST00000487952 ALKBH1Q13686 389 aaKnown RBP12.1□□□□□ -0.47
NUP188-207ENST00000487952 IRF3Q14653 427 aa12.1□□□□□ -0.47
NUP188-207ENST00000487952 MED22Q15528 200 aa12.1□□□□□ -0.47
NUP188-207ENST00000487952 GLYATL3Q5SZD4 288 aa12.1□□□□□ -0.47
NUP188-207ENST00000487952 ZNF787Q6DD87 383 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms