RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 TRRAPQ9Y4A5 3859 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 IGHV3-64DA0A0J9YX35 117 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 TVP23AA6NH52 213 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 F5H5K5 113 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 M0R135 149 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 TNFRSF11BO00300 401 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 KRT36O76013 467 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 SOX14O95416 240 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 CYB5R3P00387 301 aaPredicted RBP9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 HLA-DPB1P04440 258 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 PMELP40967 661 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 GATA4P43694 442 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 RAD23AP54725 363 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 HOXA4Q00056 320 aaPredicted RBP9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 PAX2Q02962 417 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 ECH1Q13011 328 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 CRMP1Q14194 572 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 ZNF181Q2M3W8 571 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 SLC36A3Q495N2 470 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 RASSF6Q6ZTQ3 369 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 MOGAT3Q86VF5 341 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 LNX2Q8N448 690 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 TEX29Q8N6K0 151 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 ATG16L2Q8NAA4 619 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 PROKR2Q8NFJ6 384 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 OR51L1Q8NGJ5 315 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 OR9Q1Q8NGQ5 310 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 NANPQ8TBE9 248 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 ZNF799Q96GE5 643 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 ZNF582Q96NG8 517 aaPredicted RBP9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 NMNAT2Q9BZQ4 307 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 MUC13Q9H3R2 512 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 TBC1D23Q9NUY8 699 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 ARMC1Q9NVT9 282 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 KCNG2Q9UJ96 466 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 PCDHB10Q9UN67 800 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 LRCH1Q9Y2L9 728 aa9.4□□□□□ -0.9
RAB11FIP3-210ENST00000487899 B2RBV5 119 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 HAX1O00165 279 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 CCNB2O95067 398 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 ZNF205O95201 554 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 GASTP01350 101 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 HLA-DQA2P01906 255 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 GYPBP06028 91 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 T-ENOLP0DO92 83 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 CLUP10909 449 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 RPS2P15880 293 aaKnown RBP9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 CD200P41217 278 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 SRP9P49458 86 aaKnown RBP9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 MS4A2Q01362 244 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 ZNF154Q13106 437 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 MAB21L1Q13394 359 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 PCK2Q16822 640 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 ZNF404Q494X3 552 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 FAM201AQ5SY85 155 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 ARHGAP24Q8N264 748 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 MUC20Q8N307 709 aaPredicted RBP9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 LINC00471Q8N535 108 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 ZDHHC22Q8N966 263 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 OR2AJ1Q8NGZ0 328 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 OR2T4Q8NH00 348 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 OR2AE1Q8NHA4 323 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 Q8TCH9 128 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 FAM216AQ8WUB2 273 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 C22orf15Q8WYQ4 148 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 C1orf147Q96MC9 270 aaPredicted RBP9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 SUCNR1Q9BXA5 334 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 HCAR1Q9BXC0 346 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 DGCR6LQ9BY27 220 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 SAMHD1Q9Y3Z3 626 aaKnown RBP9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 INSIG2Q9Y5U4 225 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 U3KQV3 271 aa9.39□□□□□ -0.91
RAB11FIP3-210ENST00000487899 IFNL4K9M1U5 179 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 FAM20BO75063 409 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 FSTL3O95633 263 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 PTBP3O95758 552 aaKnown RBP9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 LCATP04180 440 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 SPI1P17947 270 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 CFPP27918 469 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 COMPP49747 757 aaPredicted RBP9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 SLC25A1P53007 311 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 ACTG1P63261 375 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 ZNF92Q03936 586 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 MPPED2Q15777 294 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 ESCO2Q56NI9 601 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 ARMCX4Q5H9R4 360 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 LINC01590Q5TEZ4 76 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 PRAMEF6Q5VXH4 476 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 SLC27A4Q6P1M0 643 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 DCXRQ7Z4W1 244 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 DHFR2Q86XF0 187 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 KLBQ86Z14 1044 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 BPIFB2Q8N4F0 458 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 POP5Q969H6 163 aaKnown RBP9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 CCDC124Q96CT7 223 aaKnown RBP9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 ASB9Q96DX5 294 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 CLPTM1LQ96KA5 538 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 CCT8L2Q96SF2 557 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 NIPSNAP1Q9BPW8 284 aa9.38□□□□□ -0.91
RAB11FIP3-210ENST00000487899 TMEM246Q9BRR3 403 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms