RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 L7N2F9 121 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 DLGAP1O14490 977 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 RAB29O14966 203 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 LSM1O15116 133 aaKnown RBP3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 CASC3O15234 703 aaKnown RBP3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 CCL16O15467 120 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 EIF3GO75821 320 aaKnown RBP eCLIP3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 TSPAN13O95857 204 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 CCNE2O96020 404 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 KRT6AP02538 564 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 PRB1P04280 392 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 DRD3P35462 400 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 NSG1P42857 185 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 CCNHP51946 323 aaPredicted RBP3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 ZNF92Q03936 586 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 PSG5Q15238 335 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 SGCAQ16586 387 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 UBE2SQ16763 222 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 RFX4Q33E94 735 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 Q6ZS52 159 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 EID2Q8N6I1 236 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 CCDC54Q8NEL0 328 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 CCDC148Q8NFR7 591 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 MCOLN3Q8TDD5 553 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 TMEM54Q969K7 222 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 CCDC126Q96EE4 140 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 TMEM175Q9BSA9 504 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 NEK6Q9HC98 313 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 FGF20Q9NP95 211 aaPredicted RBP3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 ZNF302Q9NR11 478 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 DEC1Q9P2X7 70 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 NUFIP1Q9UHK0 495 aaKnown RBP3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 LSM7Q9UK45 103 aaKnown RBP3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 DDX19BQ9UMR2 479 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 CHTOPQ9Y3Y2 248 aaKnown RBP3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 CFAP46Q8IYW2 2715 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 F5P12259 2224 aa3.31□□□□□ -1.88
PRPF38A-203ENST00000487160 WI2-2373I1.2A0A1W2PRP0 233 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 A6NDX4 124 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 PCNX2A6NKB5 2137 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 TRIM49D1C9J1S8 452 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 CLOCKO15516 846 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 DNAJB6O75190 326 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 OR2J3O76001 311 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 CLIC3O95833 236 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 FTH1P02794 183 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 ANXA5P08758 320 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 OR8G3PP0DMU2 310 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 CNR1P21554 472 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 CDKN1BP46527 198 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 RPS10P46783 165 aaKnown RBP3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 CSNK1DP48730 415 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 LHX2P50458 406 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 CCR8P51685 355 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 YWHAGP61981 247 aaKnown RBP eCLIP3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 GUCA2BQ16661 112 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 ZBED5Q49AG3 693 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 PPM1LQ5SGD2 360 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 VAX1Q5SQQ9 334 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 LIN9Q5TKA1 542 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 TMEM220Q6QAJ8 160 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 TMEM135Q86UB9 458 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 KRTAP11-1Q8IUC1 163 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 LIX1Q8N485 282 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 RNF175Q8N4F7 328 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 Q8N9W7 124 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 DEFB124Q8NES8 71 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 OR6X1Q8NH79 312 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 RHEBL1Q8TAI7 183 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 DTX3LQ8TDB6 740 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 STARD8Q92502 1023 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 PEX13Q92968 403 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 RNF185Q96GF1 192 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 ZNF578Q96N58 590 aaPredicted RBP3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 MBOAT7Q96N66 472 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 TSNARE1Q96NA8 513 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 SLC29A1Q99808 456 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 BCL7BQ9BQE9 202 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 RACGAP1Q9H0H5 632 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 NEUROG2Q9H2A3 272 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 SLCO1B3Q9NPD5 702 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 CITO14578 2027 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 PCDH15Q96QU1 1955 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 ATMQ13315 3056 aa3.3□□□□□ -1.88
PRPF38A-203ENST00000487160 SCN2AQ99250 2005 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 TMEM131Q92545 1883 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 COL5A1P20908 1838 aaPredicted RBP3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 SPAARA0A1B0GVQ0 90 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 PINLYPA6NC86 204 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 SMCO2A6NFE2 343 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 H3BNH8 94 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 PEX7O00628 323 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 KRT14P02533 472 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 IGHV3-43DP0DP04 118 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 NR2C1P13056 603 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 FOLR1P15328 257 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 CSRP1P21291 193 aaKnown RBP3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 HOXA9P31269 272 aa3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 NAA10P41227 235 aaPredicted RBP3.29□□□□□ -1.88
PRPF38A-203ENST00000487160 TMED10P49755 219 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms