RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 NIPSNAP1Q9BPW8 284 aa15.52■□□□□ 0.08
PRPF40A-209ENST00000486100 TMEM100Q9NV29 134 aa15.52■□□□□ 0.08
PRPF40A-209ENST00000486100 PCDHB10Q9UN67 800 aa15.52■□□□□ 0.08
PRPF40A-209ENST00000486100 A0A1B0GWJ7 208 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 H0YL77 283 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 TMEM178BH3BS89 294 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 J3QLI3 93 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 M0R135 149 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 AVPP01185 164 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 IFNGP01579 166 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 HOXB6P17509 224 aaKnown RBP15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 SPI1P17947 270 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 GATA3P23771 443 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 SRP9P49458 86 aaKnown RBP15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 BTG1P62324 171 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 PCK2Q16822 640 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 TEX30Q5JUR7 227 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 LYPD4Q6UWN0 246 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 C1orf229Q6ZS94 237 aaPredicted RBP15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 ZNF771Q7L3S4 317 aaPredicted RBP15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 DCXRQ7Z4W1 244 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 KLHL36Q8N4N3 616 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 SPICQ8N5J4 248 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 ZNF511Q8NB15 262 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 BHLHE23Q8NDY6 225 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 OR10AD1Q8NGE0 317 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 SLCO4A1Q96BD0 722 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 ZNF799Q96GE5 643 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 TMPRSS13Q9BYE2 586 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 DDX28Q9NUL7 540 aaKnown RBP15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 COMMD3-BMI1R4GMX3 469 aa15.51■□□□□ 0.07
PRPF40A-209ENST00000486100 DHRS12A0PJE2 317 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 ARRDC5A6NEK1 342 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 ZNF593O00488 134 aaPredicted RBP15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 GNGT2O14610 69 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 GYG2O15488 501 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 MLNRO43193 412 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 GYPBP06028 91 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 OTX1P32242 354 aaPredicted RBP15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 ENTPD1P49961 510 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 BLVRAP53004 296 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 SCGB2A2Q13296 93 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 ZMYND11Q15326 602 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 DNAL1Q4LDG9 190 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 DCAF12L2Q5VW00 463 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 PGAP1Q75T13 922 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 TEX47Q8TBZ9 253 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 C19orf24Q9BVV8 132 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 OCEL1Q9H607 264 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 PATZ1Q9HBE1 687 aaKnown RBP15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 CMC2Q9NRP2 79 aa15.5■□□□□ 0.07
PRPF40A-209ENST00000486100 PPIAL4EA0A075B759 164 aa15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 PPIAL4CA0A0B4J2A2 164 aa15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 RIIAD1A6NNX1 92 aa15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 PPIAL4DF5H284 164 aa15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 F5H5P2 479 aa15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 FOXH1O75593 365 aa15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 SPARCP09486 303 aa15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 PPIAL4FP0DN26 164 aa15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 CLUP10909 449 aa15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 PSKH1P11801 424 aa15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 ZNF3P17036 446 aa15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 ZFP36P26651 326 aaKnown RBP15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 MMP16P51512 607 aa15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 LCN2P80188 198 aa15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 DRAM2Q6UX65 266 aa15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 TMEM179BQ7Z7N9 219 aa15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 ZNF420Q8TAQ5 688 aaPredicted RBP15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 SLC7A6OSQ96CW6 309 aaPredicted RBP15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 PDP1Q9P0J1 537 aaPredicted RBP15.49■□□□□ 0.07
PRPF40A-209ENST00000486100 LOC105371242A0A075B767 164 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 A0A0A6YYJ9 748 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 H3BN98 237 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 HLA-DPB1P04440 258 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 GRK5P34947 590 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 MDH2P40926 338 aaKnown RBP15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 SLC6A9P48067 706 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 PRSS12P56730 875 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 TAF13Q15543 124 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 ZNF181Q2M3W8 571 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 LINC01590Q5TEZ4 76 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 MRPL21Q7Z2W9 205 aaKnown RBP15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 MUC20Q8N307 709 aaPredicted RBP15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 CELF2-AS1Q8N7Q2 184 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 OR6K6Q8NGW6 343 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 SPRYD4Q8WW59 207 aaPredicted RBP15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 SLAMF6Q96DU3 332 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 KCNJ15Q99712 375 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 COPS4Q9BT78 406 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 REPIN1Q9BWE0 567 aaKnown RBP15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 C7orf69Q9H7B7 122 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 CENPMQ9NSP4 180 aa15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 POLR3KQ9Y2Y1 108 aaPredicted RBP15.48■□□□□ 0.07
PRPF40A-209ENST00000486100 CD300LBA8K4G0 201 aa15.47■□□□□ 0.07
PRPF40A-209ENST00000486100 CPT2P23786 658 aa15.47■□□□□ 0.07
PRPF40A-209ENST00000486100 GATA4P43694 442 aa15.47■□□□□ 0.07
PRPF40A-209ENST00000486100 PRKXP51817 358 aa15.47■□□□□ 0.07
PRPF40A-209ENST00000486100 MAB21L1Q13394 359 aa15.47■□□□□ 0.07
PRPF40A-209ENST00000486100 FLOT2Q14254 428 aa15.47■□□□□ 0.07
PRPF40A-209ENST00000486100 SNAI3Q3KNW1 292 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms