RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 DDOSTP39656 456 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 OPRL1P41146 370 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 CX3CR1P49238 355 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 DSCR9P59020 149 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 ACTA2P62736 377 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 ACTG2P63267 376 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 ADARB1P78563 741 aaKnown RBP7.12□□□□□ -1.27
SF3A1-208ENST00000485618 ROM1Q03395 351 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 SPOCK1Q08629 439 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 MZT1Q08AG7 82 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 MRPL28Q13084 256 aaKnown RBP7.12□□□□□ -1.27
SF3A1-208ENST00000485618 TIGD6Q17RP2 521 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 DEFB113Q30KQ7 82 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 PCGF3Q3KNV8 242 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 MBNL2Q5VZF2 373 aaKnown RBP7.12□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF322Q6U7Q0 402 aaPredicted RBP7.12□□□□□ -1.27
SF3A1-208ENST00000485618 TMPRSS11AQ6ZMR5 421 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 SPATC1Q76KD6 591 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 MRPL21Q7Z2W9 205 aaKnown RBP7.12□□□□□ -1.27
SF3A1-208ENST00000485618 ENTHD1Q8IYW4 607 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 LRRC75A-AS1Q8N1F1 130 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 PAQR4Q8N4S7 273 aaPredicted RBP7.12□□□□□ -1.27
SF3A1-208ENST00000485618 LILRB1Q8NHL6 650 aaPredicted RBP7.12□□□□□ -1.27
SF3A1-208ENST00000485618 ZNRF4Q8WWF5 429 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 NEU4Q8WWR8 484 aaPredicted RBP7.12□□□□□ -1.27
SF3A1-208ENST00000485618 TFAP2CQ92754 450 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 NEUROG1Q92886 237 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 PGAM5Q96HS1 289 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 MAP6Q96JE9 813 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 TRAF4Q9BUZ4 470 aaPredicted RBP7.12□□□□□ -1.27
SF3A1-208ENST00000485618 EGLN1Q9GZT9 426 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 SLC22A4Q9H015 551 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 OR51B6Q9H340 312 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 ADGRL4Q9HBW9 690 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 ZDHHC8Q9ULC8 765 aa7.12□□□□□ -1.27
SF3A1-208ENST00000485618 ARID1AO14497 2285 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 TMEM269A0A1B0GVZ9 245 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 CCDC182A6NF36 153 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 METTL15A6NJ78 407 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 E9PQ18 207 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 H7C417 338 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 M0R129 80 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 MTRF1O75570 445 aaKnown RBP7.11□□□□□ -1.27
SF3A1-208ENST00000485618 IGHV3-13P01766 116 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 CSF3P09919 207 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 DANCRP0C864 163 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 DBTP11182 482 aaKnown RBP7.11□□□□□ -1.27
SF3A1-208ENST00000485618 PAX1P15863 534 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 CD53P19397 219 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 DCKP27707 260 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 RPS27P42677 84 aaKnown RBP7.11□□□□□ -1.27
SF3A1-208ENST00000485618 PPOXP50336 477 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 MMP16P51512 607 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 PRKXP51817 358 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 ATP5J2P56134 94 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 CXCR4P61073 352 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 MAD2L1BPQ15013 274 aaPredicted RBP7.11□□□□□ -1.27
SF3A1-208ENST00000485618 KRTAP27-1Q3LI81 207 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 SHEQ5VZ18 495 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 PRSS57Q6UWY2 283 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 FBXW12Q6X9E4 464 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 B3GLCTQ6Y288 498 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 COLCA1Q6ZS62 124 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 PGAP1Q75T13 922 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 MYPOPQ86VE0 399 aaPredicted RBP7.11□□□□□ -1.27
SF3A1-208ENST00000485618 YIPF7Q8N8F6 280 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 CCDC54Q8NEL0 328 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 OR13G1Q8NGZ3 307 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 SLC25A40Q8TBP6 338 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 KLF14Q8TD94 323 aaPredicted RBP7.11□□□□□ -1.27
SF3A1-208ENST00000485618 SPRYD4Q8WW59 207 aaPredicted RBP7.11□□□□□ -1.27
SF3A1-208ENST00000485618 MYDGFQ969H8 173 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 UBE2FQ969M7 185 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 HAVCR1Q96D42 359 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 MARS2Q96GW9 593 aaKnown RBP7.11□□□□□ -1.27
SF3A1-208ENST00000485618 OR8B4Q96RC9 309 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 DOK1Q99704 481 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 VRK1Q99986 396 aaPredicted RBP7.11□□□□□ -1.27
SF3A1-208ENST00000485618 GSX2Q9BZM3 304 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 OR2J1Q9GZK6 312 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 LIME1Q9H400 295 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 GSX1Q9H4S2 264 aaPredicted RBP7.11□□□□□ -1.27
SF3A1-208ENST00000485618 MOB1AQ9H8S9 216 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 ABCB9Q9NP78 766 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 MYOZ1Q9NP98 299 aaPredicted RBP7.11□□□□□ -1.27
SF3A1-208ENST00000485618 PNRC2Q9NPJ4 139 aaKnown RBP7.11□□□□□ -1.27
SF3A1-208ENST00000485618 DECR2Q9NUI1 292 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 ZNF701Q9NV72 531 aaPredicted RBP7.11□□□□□ -1.27
SF3A1-208ENST00000485618 MRPS18AQ9NVS2 196 aaKnown RBP7.11□□□□□ -1.27
SF3A1-208ENST00000485618 TAAR3PQ9P1P4 343 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 BLOC1S6Q9UL45 172 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 RAB26Q9ULW5 256 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 STARD10Q9Y365 291 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 N6AMT1Q9Y5N5 214 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 SNX5Q9Y5X3 404 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 NAV3Q8IVL0 2385 aa7.11□□□□□ -1.27
SF3A1-208ENST00000485618 MTORP42345 2549 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.1□□□□□ -1.27
SF3A1-208ENST00000485618 A0A1W2PPR1 153 aa7.1□□□□□ -1.27
SF3A1-208ENST00000485618 A0A1W2PQL4 384 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms