RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 PEG10Q86TG7 708 aaKnown RBP8.51□□□□□ -1.05
CPSF4-213ENST00000484112 IQCF1Q8N6M8 205 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 OR9Q1Q8NGQ5 310 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 OR6K6Q8NGW6 343 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 CLDND2Q8NHS1 167 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 SLC25A40Q8TBP6 338 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 KLF14Q8TD94 323 aaPredicted RBP8.51□□□□□ -1.05
CPSF4-213ENST00000484112 INTS14Q96SY0 518 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 C1QTNF5Q9BXJ0 243 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 SEMA6AQ9H2E6 1030 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 SP140LQ9H930 580 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 S100A14Q9HCY8 104 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 PNRC2Q9NPJ4 139 aaKnown RBP8.51□□□□□ -1.05
CPSF4-213ENST00000484112 HINT3Q9NQE9 182 aaKnown RBP8.51□□□□□ -1.05
CPSF4-213ENST00000484112 TREM2Q9NZC2 230 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 ZDHHC8Q9ULC8 765 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 PCDHB10Q9UN67 800 aa8.51□□□□□ -1.05
CPSF4-213ENST00000484112 TMEM89A2RUT3 159 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 SLC22A31A6NKX4 558 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 C17orf100A8MU93 164 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 ZNF878C9JN71 531 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 ANKRD65E5RJM6 399 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 GPANK1O95872 356 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 ALPLP05186 524 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 MSMBP08118 114 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 SPARCP09486 303 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 SELEP16581 610 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 KITLGP21583 273 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 SLC2A5P22732 501 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 ALDH3B1P43353 468 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 COMPP49747 757 aaPredicted RBP8.5□□□□□ -1.05
CPSF4-213ENST00000484112 MMP15P51511 669 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 ALDH3A2P51648 485 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 RAD23AP54725 363 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 EFNB1P98172 346 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 SCGB2A2Q13296 93 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 TMED1Q13445 227 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 MSMPQ1L6U9 139 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 NXNL2Q5VZ03 156 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 C12orf73Q69YU5 71 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 PLBD1Q6P4A8 553 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 TMEM154Q6P9G4 183 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 CORO6Q6QEF8 472 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 FBXW12Q6X9E4 464 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 CFAP77Q6ZQR2 320 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 RFPL4BQ6ZWI9 263 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 DCXRQ7Z4W1 244 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 CPOQ8IVL8 374 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 ICA1LQ8NDH6 482 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 OR51L1Q8NGJ5 315 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 ST7LQ8TDW4 575 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 ZNRF4Q8WWF5 429 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 TRUB1Q8WWH5 349 aaKnown RBP8.5□□□□□ -1.05
CPSF4-213ENST00000484112 STMN2Q93045 179 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 ITFG2Q969R8 447 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 HAVCR1Q96D42 359 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 MAP6Q96JE9 813 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 MNTQ99583 582 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 KCNJ15Q99712 375 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 CIB1Q99828 191 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 PKP2Q99959 881 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 SYT3Q9BQG1 590 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 C9orf16Q9BUW7 83 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 OR2J1Q9GZK6 312 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 OPA3Q9H6K4 179 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 WDR76Q9H967 626 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 C8orf4Q9NR00 106 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 TVP23BQ9NYZ1 205 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 TAAR3PQ9P1P4 343 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 TMEM14AQ9Y6G1 99 aa8.5□□□□□ -1.05
CPSF4-213ENST00000484112 TVP23AA6NH52 213 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 FAM183AA6NL82 134 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 M0R135 149 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 WNT9BO14905 357 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 PPIHO43447 177 aaKnown RBP8.49□□□□□ -1.05
CPSF4-213ENST00000484112 NGFP01138 241 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 HPXP02790 462 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 GYPBP06028 91 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 ACSM4P0C7M7 580 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 CLUP10909 449 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 ACHEP22303 614 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 CDC42P60953 191 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 ERVS71-1P61550 626 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 MALLQ13021 153 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 MAD2L1BPQ15013 274 aaPredicted RBP8.49□□□□□ -1.05
CPSF4-213ENST00000484112 DEGS2Q6QHC5 323 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.49□□□□□ -1.05
CPSF4-213ENST00000484112 LRP11Q86VZ4 500 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 ERI1Q8IV48 349 aaKnown RBP8.49□□□□□ -1.05
CPSF4-213ENST00000484112 LINC00346Q8IVM7 164 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 GID4Q8IVV7 300 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 TIGD4Q8IY51 512 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 PQLC1Q8N2U9 271 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 ZNF511Q8NB15 262 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 OR8J1Q8NGP2 316 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 OR51F2Q8NH61 342 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 OTOSQ8NHW6 89 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 TMEM163Q8TC26 289 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 FAM216AQ8WUB2 273 aa8.49□□□□□ -1.05
CPSF4-213ENST00000484112 RNF133Q8WVZ7 376 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms