RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 TPD52L3Q96J77 140 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 WDFY2Q96P53 400 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 TECTBQ96PL2 329 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 TBX15Q96SF7 602 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 ECSITQ9BQ95 431 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 TRIM15Q9C019 465 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 MMADHCQ9H3L0 296 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-206ENST00000483030 UFSP2Q9NUQ7 469 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 RHCGQ9UBD6 479 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 A4GNTQ9UNA3 340 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 COA3Q9Y2R0 106 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-206ENST00000483030 ADAM18Q9Y3Q7 739 aa6.12□□□□□ -1.43
CSDE1-206ENST00000483030 IGHV1-69DA0A0B4J2H0 117 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 TEX13CA0A0J9YWL9 993 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 A0A0U1RQK1 487 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 PRSS37A4D1T9 235 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 IQCF6A8MYZ5 107 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 J3QW42 95 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 IMPA2O14732 288 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 AHCYL1O43865 530 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 SLC16A7O60669 478 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 FAM20BO75063 409 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 KHDRBS3O75525 346 aaKnown RBP6.11□□□□□ -1.43
CSDE1-206ENST00000483030 ALX3O95076 343 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 IFNA14P01570 189 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 IGHV1-69P01742 117 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 CD14P08571 375 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 ZNF26P17031 533 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-206ENST00000483030 BTF3P20290 206 aaKnown RBP6.11□□□□□ -1.43
CSDE1-206ENST00000483030 IFNA8P32881 189 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 GATA4P43694 442 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 IER3P46695 156 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 SLC9A3P48764 834 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 NPY4RP50391 375 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 LSM6P62312 80 aaKnown RBP6.11□□□□□ -1.43
CSDE1-206ENST00000483030 ARF6P62330 175 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 CTAG1AP78358 180 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 PRKCDQ05655 676 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 MRPL28Q13084 256 aaKnown RBP6.11□□□□□ -1.43
CSDE1-206ENST00000483030 CYLC2Q14093 348 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-206ENST00000483030 MPPED2Q15777 294 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 RSPO1Q2MKA7 263 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-206ENST00000483030 ANKDD1AQ495B1 522 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 CYBRD1Q53TN4 286 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 MESTQ5EB52 335 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 CLEC12AQ5QGZ9 265 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 METTL11BQ5VVY1 283 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 PRAMEF6Q5VXH4 476 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 SFRP4Q6FHJ7 346 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-206ENST00000483030 TBPL2Q6SJ96 375 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 Q6ZSV7 163 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-206ENST00000483030 GLB1L2Q8IW92 636 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 PDZD9Q8IXQ8 264 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 CELF2-AS1Q8N7Q2 184 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 ZSCAN4Q8NAM6 433 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-206ENST00000483030 SCCPDHQ8NBX0 429 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 SUN5Q8TC36 379 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 Q8TCH9 128 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 TSPEARQ8WU66 669 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 PRRC1Q96M27 445 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 ZNF583Q96ND8 569 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 FNDC11Q9BVV2 318 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 HCAR1Q9BXC0 346 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 SIRPDQ9H106 197 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 SYT4Q9H2B2 425 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 ERVK-18Q9QC07 812 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 CTSZQ9UBR2 303 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 SNX13Q9Y5W8 968 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 TANC2Q9HCD6 1990 aa6.11□□□□□ -1.43
CSDE1-206ENST00000483030 A0A0B4J203 849 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 ZNF816-ZNF321PA0A0X1KG74 233 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 A0A1B0GWJ7 208 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 ELOVL7A1L3X0 281 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 G3V4G9 280 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 J3KTA2 159 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 LGALS8O00214 317 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 CDC42EP2O14613 210 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 ADAM20O43506 726 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 PRB2P02812 416 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-206ENST00000483030 CSF1P09603 554 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 KDELR2P33947 212 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 GPR4P46093 362 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 CENPAP49450 140 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 RAD23AP54725 363 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 POU4F2Q12837 409 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 TRAM2Q15035 370 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 OR8B8Q15620 311 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 MEP1BQ16820 701 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 C2orf68Q2NKX9 166 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 ZBED5Q49AG3 693 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 LRRC23Q53EV4 343 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-206ENST00000483030 ERICH5Q6P6B1 374 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 CORO6Q6QEF8 472 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 ZNF730Q6ZMV8 503 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 GDPGP1Q6ZNW5 385 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 FAM122BQ7Z309 247 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 NAA40Q86UY6 237 aa6.1□□□□□ -1.43
CSDE1-206ENST00000483030 RNF113BQ8IZP6 322 aaKnown RBP6.1□□□□□ -1.43
CSDE1-206ENST00000483030 PNLDC1Q8NA58 520 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms