RNA–Protein interactions for RNA: ENST00000482028.5

PABPC4-213, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 2

Gene PABPC4, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-213	ENST00000482028	DOCK10	Q96BY6	2186 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	IGKV1D-43	A0A0B4J1Z2	117 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	OR6C6	A6NF89	314 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	ZNF814	B7Z6K7	855 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	WDPCP	O95876	746 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	COX5B	P10606	129 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	GDNF	P39905	211 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	EIF2S3	P41091	472 aa	Known RBP	11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	POU3F4	P49335	361 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	EIF2B2	P49770	351 aa	Known RBP	11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	TAS2R20	P59543	309 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	PLGLB1	Q02325	96 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	C19orf57	Q0VDD7	668 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	GPR176	Q14439	515 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	SLC10A1	Q14973	349 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	ZMYND11	Q15326	602 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	SGCA	Q16586	387 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	SLC36A2	Q495M3	483 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	PLA1A	Q53H76	456 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	ZBTB37	Q5TC79	503 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	ZNF813	Q6ZN06	617 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	CFAP77	Q6ZQR2	320 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	YRDC	Q86U90	279 aa	Known RBP	11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	SULF2	Q8IWU5	870 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	ZNF283	Q8N7M2	679 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	OR51A4	Q8NGJ6	313 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	NABP1	Q96AH0	204 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	ZNF416	Q9BWM5	594 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	RBM24	Q9BX46	236 aa	Known RBP	11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	TTTY12	Q9BZ98	90 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	OPA3	Q9H6K4	179 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	EXO5	Q9H790	373 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	BCO1	Q9HAY6	547 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	PNRC2	Q9NPJ4	139 aa	Known RBP	11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	DEPP	Q9NTK1	212 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	TMEM38B	Q9NVV0	291 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	ANKRD10	Q9NXR5	420 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	ZNF175	Q9Y473	711 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	TIMM10B	Q9Y5J6	103 aa		11.44	□□□□□ -0.58
PABPC4-213	ENST00000482028	ANKRD20A5P	A0PJZ0	165 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028		H7C417	338 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	CXCL13	O43927	109 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	MRPL33	O75394	65 aa	Known RBP	11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	CTAG2	O75638	210 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	DHRS3	O75911	302 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	IGLV3-1	P01715	115 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	ITGA5	P08648	1049 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	CPN1	P15169	458 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	TBP	P20226	339 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	CDK2	P24941	298 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	PRSS3	P35030	304 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	ALDH3B1	P43353	468 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	PTH2R	P49190	550 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	LHX2	P50458	406 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	CLDN15	P56746	228 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	CLDN6	P56747	220 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	ZNF121	P58317	390 aa	Predicted RBP	11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	KLF9	Q13886	244 aa	Predicted RBP	11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.43	□□□□□ -0.58	6e-7	■■■■□ 23.1
PABPC4-213	ENST00000482028	TATDN3	Q17R31	274 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	C2orf76	Q3KRA6	126 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	WIPI1	Q5MNZ9	446 aa	Predicted RBP	11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	GLYATL3	Q5SZD4	288 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	CARD17	Q5XLA6	110 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	SPINK14	Q6IE38	97 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	IGFL2	Q6UWQ7	119 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	BTN2A1	Q7KYR7	527 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	FGD2	Q7Z6J4	655 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	OR10S1	Q8NGN2	331 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	ASB13	Q8WXK3	278 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	PGAM5	Q96HS1	289 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	ZNF385A	Q96PM9	386 aa	Known RBP	11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	SRXN1	Q9BYN0	137 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	CCDC86	Q9H6F5	360 aa	Known RBP	11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	PCDHB16	Q9NRJ7	776 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	UPB1	Q9UBR1	384 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	MTFP1	Q9UDX5	166 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	FBXL3	Q9UKT7	428 aa		11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	PAIP2B	Q9ULR5	123 aa	Known RBP	11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	MRPS7	Q9Y2R9	242 aa	Known RBP	11.43	□□□□□ -0.58
PABPC4-213	ENST00000482028	C7orf66	A4D0T2	115 aa		11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	ZNF891	A8MT65	544 aa	Predicted RBP	11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028		G3V3Y1	287 aa		11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	P2RY10	O00398	339 aa		11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	SGCE	O43556	437 aa		11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	TCRB	P04435	133 aa		11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	LPL	P06858	475 aa		11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	SPN	P16150	400 aa		11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	RCVRN	P35243	200 aa		11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	ARG2	P78540	354 aa		11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	GALK2	Q01415	458 aa		11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	DBP	Q10586	325 aa	Predicted RBP	11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	ENDOG	Q14249	297 aa	Known RBP	11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	CORO6	Q6QEF8	472 aa		11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	SPATC1	Q76KD6	591 aa		11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	TMPRSS7	Q7RTY8	843 aa		11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	CCDC36	Q8IYA8	594 aa		11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	ZNF100	Q8IYN0	542 aa		11.42	□□□□□ -0.58
PABPC4-213	ENST00000482028	TCTE3	Q8IZS6	198 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms