RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 CELA3AP09093 270 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 CSF1P09603 554 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 ANXA7P20073 488 aaKnown RBP12.8□□□□□ -0.36
CHD3-211ENST00000481999 EIF1P41567 113 aaKnown RBP12.8□□□□□ -0.36
CHD3-211ENST00000481999 ARPC4P59998 168 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 RAP1BP61224 184 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 RAP2BP61225 183 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 RAP1AP62834 184 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 DMRTC1Q5HYR2 192 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 CLLU1Q5K131 121 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 TMEM164Q5U3C3 297 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 NOXO1Q8NFA2 376 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 OR14L1PQ8NHC6 308 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 RNF128Q8TEB7 428 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 SLC25A44Q96H78 314 aaPredicted RBP12.8□□□□□ -0.36
CHD3-211ENST00000481999 DOCK7Q96N67 2140 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 RER1O15258 196 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 WDPCPO95876 746 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 NTF4P34130 210 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 SUCLG1P53597 346 aaKnown RBP12.8□□□□□ -0.36
CHD3-211ENST00000481999 AP2S1P53680 142 aaPredicted RBP12.8□□□□□ -0.36
CHD3-211ENST00000481999 DHODHQ02127 395 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 HYAL4Q2M3T9 481 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 PCGF3Q3KNV8 242 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 UXS1Q8NBZ7 420 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 ZPBPQ9BS86 351 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 SOX7Q9BT81 388 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 GLTPQ9NZD2 209 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 PIPOXQ9P0Z9 390 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 LRFN1Q9P244 771 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 TTLL8A6PVC2 850 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 TERTO14746 1132 aaKnown RBP12.79□□□□□ -0.36
CHD3-211ENST00000481999 CTAG2O75638 210 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 SERPINA7P05543 415 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 QDPRP09417 244 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 ITGA3P26006 1051 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 ADH6P28332 368 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 CD96P40200 585 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 CYB561P49447 251 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 RIDAP52758 137 aaKnown RBP12.79□□□□□ -0.36
CHD3-211ENST00000481999 PSMA6P60900 246 aaKnown RBP12.79□□□□□ -0.36
CHD3-211ENST00000481999 H3F3AP84243 136 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 ROM1Q03395 351 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 RBMS2Q15434 407 aaKnown RBP12.79□□□□□ -0.36
CHD3-211ENST00000481999 RAB11BQ15907 218 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 TEX30Q5JUR7 227 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 PLPP7Q8NBV4 271 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 OR51D1Q8NGF3 324 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 OR51A2Q8NGJ7 313 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 NTNG2Q96CW9 530 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 SLC17A5Q9NRA2 495 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 ASH2LQ9UBL3 628 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 MAB21L2Q9Y586 359 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 LHFPL6Q9Y693 200 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 RPS10-NUDT3A0A1W2PQS6 291 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 SLC17A2O00624 439 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 CBR3O75828 277 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 OR2A4O95047 310 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 IGHG1P01857 330 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 POU3F4P49335 361 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 B3GALT5-AS1P59052 145 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 RAB14P61106 215 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 GRK1Q15835 563 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 KCTD18Q6PI47 426 aaPredicted RBP12.79□□□□□ -0.36
CHD3-211ENST00000481999 ARMC10Q8N2F6 343 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 IL22RA1Q8N6P7 574 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 RBP7Q96R05 134 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 OR2A7Q96R45 310 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 CA10Q9NS85 328 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 TMA7Q9Y2S6 64 aaKnown RBP12.79□□□□□ -0.36
CHD3-211ENST00000481999 HDGFL3Q9Y3E1 203 aa12.79□□□□□ -0.36
CHD3-211ENST00000481999 KIAA1549Q9HCM3 1950 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 LOC100289279A0A1B0GTE1 492 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 TMEM269A0A1B0GVZ9 245 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 UBE2QL1A1L167 161 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 ITGA5P08648 1049 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 MAP2K6P52564 334 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 CLDN15P56746 228 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 POU4F3Q15319 338 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 CSRP2Q16527 193 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 TOR2AQ5JU69 321 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 DCAF10Q5QP82 559 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 OR4C16Q8NGL9 310 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 SLC25A43Q8WUT9 341 aaPredicted RBP12.78□□□□□ -0.36
CHD3-211ENST00000481999 ROBO4Q8WZ75 1007 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 FAM3DQ96BQ1 224 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 SGCZQ96LD1 299 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 OXGR1Q96P68 337 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 GAL3ST1Q99999 423 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 FANCFQ9NPI8 374 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 MYEF2Q9P2K5 600 aaKnown RBP12.78□□□□□ -0.36
CHD3-211ENST00000481999 C5orf63A6NC05 138 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 PYCARD-AS1I3L0S3 204 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 SHOXO15266 292 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 SRSF10O75494 262 aaKnown RBP12.78□□□□□ -0.36
CHD3-211ENST00000481999 NEURL1O76050 574 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 IGHEP01854 428 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 ICAM2P13598 275 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 EFNB2P52799 333 aa12.78□□□□□ -0.36
CHD3-211ENST00000481999 FAM209AQ5JX71 171 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms