RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 HIST2H3PS2Q5TEC6 136 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 HIST2H3AQ71DI3 136 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 PLPP7Q8NBV4 271 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 OR51D1Q8NGF3 324 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 OR10D3Q8NH80 312 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 TMEM138Q9NPI0 162 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 PAQR5Q9NXK6 330 aaPredicted RBP13.9□□□□□ -0.18
RXRA-202ENST00000481739 FLVCR1Q9Y5Y0 555 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 NCKAP5O14513 1909 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 IGHV3-15A0A0B4J1V0 119 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 A0A0B4J293 547 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 ZNF716A6NP11 495 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 KLRC4-KLRK1H3BQV0 150 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 H3BSH0 61 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 RER1O15258 196 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 ARSBP15848 533 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 BDKRB2P30411 391 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 ID4P47928 161 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 C2orf76Q3KRA6 126 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 ZNF766Q5HY98 468 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 FAM27BQ5VT28 67 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 PGAP1Q75T13 922 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 ADGRE4PQ86SQ3 457 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 IZUMO1Q8IYV9 350 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 UBASH3BQ8TF42 649 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 SLC25A28Q96A46 364 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 NABP1Q96AH0 204 aa13.9□□□□□ -0.18
RXRA-202ENST00000481739 APC2O95996 2303 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 MED12Q93074 2177 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 FAM166BA8MTA8 275 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 CXCL13O43927 109 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 TCRBP04435 133 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 GABRA1P14867 456 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 RAB6AP20340 208 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 CX3CR1P49238 355 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 SRP9P49458 86 aaKnown RBP13.89□□□□□ -0.19
RXRA-202ENST00000481739 SELENOPP49908 381 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 MEOX1P50221 254 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 ZNF121P58317 390 aaPredicted RBP13.89□□□□□ -0.19
RXRA-202ENST00000481739 TBRG1Q3YBR2 411 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 ELFN2Q5R3F8 820 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 GLYATL3Q5SZD4 288 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 ZNF529Q6P280 563 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 DOK3Q7L591 496 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 PRSS45Q7RTY3 260 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 SPACA3Q8IXA5 215 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 GPR137CQ8N3F9 429 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 OR52I2Q8NH67 350 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 CPT1CQ8TCG5 803 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 TMEM45BQ96B21 275 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 CACNG6Q9BXT2 260 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 AUNIPQ9H7T9 357 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 EMC3Q9P0I2 261 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 ALG5Q9Y673 324 aa13.89□□□□□ -0.19
RXRA-202ENST00000481739 ANKRD20A5PA0PJZ0 165 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 SULT1C2O00338 296 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 RRP8O43159 456 aaKnown RBP13.88□□□□□ -0.19
RXRA-202ENST00000481739 CYTIPO60759 359 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 SCGNO76038 276 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 ZNF20P17024 532 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 RAB3AP20336 220 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 FAUP35544 74 aaKnown RBP13.88□□□□□ -0.19
RXRA-202ENST00000481739 EIF2S3P41091 472 aaKnown RBP13.88□□□□□ -0.19
RXRA-202ENST00000481739 ENDOGQ14249 297 aaKnown RBP13.88□□□□□ -0.19
RXRA-202ENST00000481739 ATAD3CQ5T2N8 411 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 OLFML2AQ68BL7 652 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 ZNF813Q6ZN06 617 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 LYPD6Q86Y78 171 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 SLC22A24Q8N4F4 322 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 JAGN1Q8N5M9 183 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 ZNF283Q8N7M2 679 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 TMEM178AQ8NBL3 297 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 FGGYQ96C11 551 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 ST6GAL2Q96JF0 529 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 TRAF4Q9BUZ4 470 aaPredicted RBP13.88□□□□□ -0.19
RXRA-202ENST00000481739 RBM24Q9BX46 236 aaKnown RBP13.88□□□□□ -0.19
RXRA-202ENST00000481739 TTTY12Q9BZ98 90 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 METTL17Q9H7H0 456 aaPredicted RBP13.88□□□□□ -0.19
RXRA-202ENST00000481739 ACACAQ13085 2346 aa13.88□□□□□ -0.19
RXRA-202ENST00000481739 A0A0U1RQV5 110 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 A0A1B0GTI1 187 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 TMEM272A0A1B0GTI8 110 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 C7orf66A4D0T2 115 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 OTX1P32242 354 aaPredicted RBP13.87□□□□□ -0.19
RXRA-202ENST00000481739 GNALP38405 381 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 TNFSF10P50591 281 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 ECH1Q13011 328 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 STK11Q15831 433 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 HYAL4Q2M3T9 481 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 NRN1LQ496H8 165 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 RAB12Q6IQ22 244 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 BTN2A1Q7KYR7 527 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 AAED1Q7RTV5 226 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 ABHD12BQ7Z5M8 362 aaPredicted RBP13.87□□□□□ -0.19
RXRA-202ENST00000481739 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.87□□□□□ -0.19
RXRA-202ENST00000481739 OR1M1Q8NGA1 313 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 OR8B12Q8NGG6 310 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 OR56B4Q8NH76 319 aa13.87□□□□□ -0.19
RXRA-202ENST00000481739 AKAP1Q92667 903 aaKnown RBP eCLIP13.87□□□□□ -0.195e-7■■■□□ 14.7
RXRA-202ENST00000481739 FAM122AQ96E09 287 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms