RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 REEP5Q00765 189 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 DUSP8Q13202 625 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 ANKRD55Q3KP44 614 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 MTSS1LQ765P7 747 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 ZCCHC10Q8TBK6 192 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 CMKLR1Q99788 373 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 KXD1Q9BQD3 176 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 MENTQ9BUN1 341 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.02■□□□□ 0.64
SDF4-206ENST00000478938 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.02■□□□□ 0.64
SDF4-206ENST00000478938 H0YL77 283 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 MSX1P28360 303 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 RPL12P30050 165 aaKnown RBP19.02■□□□□ 0.64
SDF4-206ENST00000478938 DMWDQ09019 674 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 DCAF10Q5QP82 559 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 CLEC18BQ6UXF7 455 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 MDGA2Q7Z553 956 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 POC1AQ8NBT0 407 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 COL26A1Q96A83 441 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 SLC26A1Q9H2B4 701 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 RAB18Q9NP72 206 aa19.02■□□□□ 0.64
SDF4-206ENST00000478938 ZNF107Q9UII5 783 aaPredicted RBP19.02■□□□□ 0.64
SDF4-206ENST00000478938 HEATR5AQ86XA9 2040 aa19.02■□□□□ 0.63
SDF4-206ENST00000478938 JTBO76095 146 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 LINC00614P0C842 121 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 DANCRP0C864 163 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 CFPP27918 469 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 KIR3DL2P43630 455 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 TMEM33P57088 247 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 TRA2BP62995 288 aaKnown RBP19.01■□□□□ 0.63
SDF4-206ENST00000478938 HNF4GQ14541 408 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 POM121L1PQ3SYA9 428 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 Q6ZVU0 165 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 HSD17B11Q8NBQ5 300 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 TMEM230Q96A57 120 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 SDF2Q99470 211 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 OR2AG1Q9H205 316 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 FLRT3Q9NZU0 649 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 MRPS18BQ9Y676 258 aaKnown RBP19.01■□□□□ 0.63
SDF4-206ENST00000478938 PRH1P02810 166 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 SERPINA2P20848 420 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 SLC35A1P78382 337 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 FAM3AP98173 230 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 AARDQ4LEZ3 155 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 CLLU1OSQ5K130 101 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 GLB1LQ6UWU2 654 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 KDM8Q8N371 416 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 OR13D1Q8NGV5 346 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 PBDC1Q9BVG4 233 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 ACTR3CQ9C0K3 210 aaPredicted RBP19.01■□□□□ 0.63
SDF4-206ENST00000478938 Q9N2J8 555 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 SAGE1Q9NXZ1 904 aa19.01■□□□□ 0.63
SDF4-206ENST00000478938 GMFGO60234 142 aa19■□□□□ 0.63
SDF4-206ENST00000478938 SCAF4O95104 1147 aaKnown RBP19■□□□□ 0.63
SDF4-206ENST00000478938 IFNA6P05013 189 aa19■□□□□ 0.63
SDF4-206ENST00000478938 OR4A8P0C604 315 aa19■□□□□ 0.63
SDF4-206ENST00000478938 DLK1P80370 383 aa19■□□□□ 0.63
SDF4-206ENST00000478938 PLAURQ03405 335 aa19■□□□□ 0.63
SDF4-206ENST00000478938 GAGE1Q13065 139 aa19■□□□□ 0.63
SDF4-206ENST00000478938 FAM78AQ5JUQ0 283 aa19■□□□□ 0.63
SDF4-206ENST00000478938 CSNK1A1LQ8N752 337 aa19■□□□□ 0.63
SDF4-206ENST00000478938 OR9A4Q8NGU2 314 aa19■□□□□ 0.63
SDF4-206ENST00000478938 NMNAT2Q9BZQ4 307 aa19■□□□□ 0.63
SDF4-206ENST00000478938 PELI2Q9HAT8 420 aa19■□□□□ 0.63
SDF4-206ENST00000478938 LUZP4Q9P127 313 aa19■□□□□ 0.63
SDF4-206ENST00000478938 ENTPD2Q9Y5L3 495 aa19■□□□□ 0.63
SDF4-206ENST00000478938 PLXNA2O75051 1894 aa19■□□□□ 0.63
SDF4-206ENST00000478938 K7EPK0 472 aa19■□□□□ 0.63
SDF4-206ENST00000478938 ERI3O43414 337 aaKnown RBP19■□□□□ 0.63
SDF4-206ENST00000478938 CRYABP02511 175 aaKnown RBP19■□□□□ 0.63
SDF4-206ENST00000478938 MMP7P09237 267 aaPredicted RBP19■□□□□ 0.63
SDF4-206ENST00000478938 PET100P0DJ07 73 aa19■□□□□ 0.63
SDF4-206ENST00000478938 MDKP21741 143 aaPredicted RBP19■□□□□ 0.63
SDF4-206ENST00000478938 THPOP40225 353 aa19■□□□□ 0.63
SDF4-206ENST00000478938 HAGHQ16775 308 aa19■□□□□ 0.63
SDF4-206ENST00000478938 SLC22A25Q6T423 547 aa19■□□□□ 0.63
SDF4-206ENST00000478938 FAM71E2Q8N5Q1 922 aa19■□□□□ 0.63
SDF4-206ENST00000478938 GPR87Q9BY21 358 aa19■□□□□ 0.63
SDF4-206ENST00000478938 DPEP2Q9H4A9 486 aa19■□□□□ 0.63
SDF4-206ENST00000478938 RAB22AQ9UL26 194 aa19■□□□□ 0.63
SDF4-206ENST00000478938 A0A1B0GWA3 101 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 TMEM212A6NML5 194 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 MASP2O00187 686 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 PGA3P0DJD8 388 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 GIMD1P0DJR0 217 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 TMEM128Q5BJH2 165 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 OTPQ5XKR4 325 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 SLC48A1Q6P1K1 146 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 RTN4RL2Q86UN3 420 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 APCDD1LQ8NCL9 501 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 ERGIC1Q969X5 290 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 PPP1R14AQ96A00 147 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 C2orf50Q96LR7 162 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 CES1P1Q9UKY3 287 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 GTF2A1LQ9UNN4 478 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 USP34Q70CQ2 3546 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 DCDC2BA2VCK2 349 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 ATXN7O15265 892 aaPredicted RBP18.99■□□□□ 0.63
SDF4-206ENST00000478938 GAPDHP04406 335 aaKnown RBP18.99■□□□□ 0.63
SDF4-206ENST00000478938 ZNF708P17019 499 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms