RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 RAB9AP51151 201 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 CCL23P55773 120 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 TAS2R46P59540 309 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 GPX6P59796 221 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 CBX1P83916 185 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 CUL2Q13617 745 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 LGALSLQ3ZCW2 172 aaPredicted RBP0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 C1QTNF12Q5T7M4 302 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 GPR107Q5VW38 600 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 MDP1Q86V88 176 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 CDR2LQ86X02 465 aaPredicted RBP0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 PDIK1LQ8N165 341 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 HDDC3Q8N4P3 179 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 C11orf72Q8NBR9 251 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 PKNOX2Q96KN3 472 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 GPA33Q99795 319 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 MICU1Q9BPX6 476 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 PDCD1LG2Q9BQ51 273 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 AZI2Q9H6S1 392 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 NIPAL2Q9H841 368 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 SPATA31E1Q6ZUB1 1445 aa0.04□□□□□ -2.4
NCKAP1-204ENST00000477988 MICAL3Q7RTP6 2002 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 GOLGA8SH3BPF8 625 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 DNALI1O14645 258 aaPredicted RBP0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 PSTPIP1O43586 416 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 CDC40O60508 579 aaKnown RBP eCLIP0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 MT-ND4P03905 459 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 GRIA1P42261 906 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 EMP2P54851 167 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 PNOCQ13519 176 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 QPRTQ15274 297 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 MSRB3Q8IXL7 192 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 STEAP2Q8NFT2 490 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 OR5B3Q8NH48 314 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 SCFD1Q8WVM8 642 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 UBE2Q2Q8WVN8 375 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 SLC25A44Q96H78 314 aaPredicted RBP0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 PSKH2Q96QS6 385 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 MTCH1Q9NZJ7 389 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 DDX19BQ9UMR2 479 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 PIGLQ9Y2B2 252 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 SLC22A7Q9Y694 548 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 KCNE3Q9Y6H6 103 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 U3KQV3 271 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 SDK1Q7Z5N4 2213 aa0.03□□□□□ -2.4
NCKAP1-204ENST00000477988 IGKV1-27A0A075B6S5 117 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 GOLGA6L4A6NEF3 574 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 H3BQ85 93 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 EEDO75530 441 aaKnown RBP0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 SCO1O75880 301 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 SCGNO76038 276 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 CLDN9O95484 217 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 IGHV1-46P01743 117 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 GPX4P36969 197 aaPredicted RBP0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 FOXF1Q12946 379 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 N4BP2L1Q5TBK1 243 aaPredicted RBP0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 PSTKQ8IV42 348 aaKnown RBP0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 BBS7Q8IWZ6 715 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 OR4D6Q8NGJ1 314 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 OR1S2Q8NGQ3 325 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 OR4K13Q8NH42 304 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 C12orf42Q96LP6 360 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 RPRD1AQ96P16 312 aaPredicted RBP0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 HIGD2AQ9BW72 106 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 OR2S2Q9NQN1 319 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 FSIP2Q5CZC0 6907 aa0.02□□□□□ -2.41
NCKAP1-204ENST00000477988 GLYATL1P3A0A0U1RQE8 302 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 MYBPHLA2RUH7 354 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 TNFRSF11BO00300 401 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 PSCAO43653 123 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 SEC22BO75396 215 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 KCNK2O95069 426 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 RPA2P15927 270 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 GAP43P17677 238 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 NELFEP18615 380 aaKnown RBP0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 U2AF2P26368 475 aaKnown RBP eCLIP0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 PRR3P79522 188 aaKnown RBP0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 ZNF77Q15935 545 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 CCDC184Q52MB2 194 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 ZNF678Q5SXM1 525 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 MRPL55Q7Z7F7 128 aaKnown RBP0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 NPWQ8N729 165 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 CHST4Q8NCG5 386 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 OR52N1Q8NH53 320 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 SLC7A13Q8TCU3 470 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 TCEANC2Q96MN5 208 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 PARD6BQ9BYG5 372 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 TUBA4BQ9H853 241 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 COQ10BQ9H8M1 238 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 LSM7Q9UK45 103 aaKnown RBP0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 PTBP2Q9UKA9 531 aaKnown RBP0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 NUP50Q9UKX7 468 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 ADGRB3O60242 1522 aa0.01□□□□□ -2.41
NCKAP1-204ENST00000477988 IGKV1OR2-108A0A075B7D4 117 aa0□□□□□ -2.41
NCKAP1-204ENST00000477988 LRRIQ3A6PVS8 624 aaPredicted RBP0□□□□□ -2.41
NCKAP1-204ENST00000477988 A8MWL6 223 aa0□□□□□ -2.41
NCKAP1-204ENST00000477988 G3V3Q6 166 aa0□□□□□ -2.41
NCKAP1-204ENST00000477988 CDC7O00311 574 aa0□□□□□ -2.41
NCKAP1-204ENST00000477988 TSPAN13O95857 204 aa0□□□□□ -2.41
NCKAP1-204ENST00000477988 APLNRP35414 380 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms