RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	TMEM123	Q8N131	208 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	LRRC18	Q8N456	261 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	GALNT4	Q8N4A0	578 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	CBR4	Q8N4T8	237 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	DHRSX	Q8N5I4	330 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	LRRC75A	Q8NAA5	344 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	GJC3	Q8NFK1	279 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	OR8J1	Q8NGP2	316 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	OR6K6	Q8NGW6	343 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	ZNF519	Q8TB69	540 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	FAM81A	Q8TBF8	368 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	TRUB1	Q8WWH5	349 aa	Known RBP	3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	CYGB	Q8WWM9	190 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	IPCEF1	Q8WWN9	437 aa	Predicted RBP	3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	HDAC2	Q92769	488 aa	Known RBP	3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	RASD2	Q96D21	266 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	PIK3IP1	Q96FE7	263 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	COG8	Q96MW5	612 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	MUS81	Q96NY9	551 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	WFIKKN1	Q96NZ8	548 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	NMNAT3	Q96T66	252 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	MRPL13	Q9BYD1	178 aa	Known RBP	3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	NUAK2	Q9H093	628 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	RACGAP1	Q9H0H5	632 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	RNPEPL1	Q9HAU8	725 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	NTN4	Q9HB63	628 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	SLC25A19	Q9HC21	320 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	TCF7L1	Q9HCS4	588 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	CMC2	Q9NRP2	79 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	TMEM38B	Q9NVV0	291 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	CLN6	Q9NWW5	311 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	CHCHD3	Q9NX63	227 aa	Known RBP	3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	VNN3	Q9NY84	501 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	PLEK2	Q9NYT0	353 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	USE1	Q9NZ43	259 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	RRP15	Q9Y3B9	282 aa	Known RBP	3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	PCDHGB1	Q9Y5G3	927 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	TIMM10B	Q9Y5J6	103 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	TMEM14A	Q9Y6G1	99 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	CHD6	Q8TD26	2715 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	DOCK7	Q96N67	2140 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	ZFHX4	Q86UP3	3567 aa		3.91	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	MED12	Q93074	2177 aa		3.9	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	NBAS	A2RRP1	2371 aa		3.9	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	DIDO1	Q9BTC0	2240 aa	Known RBP	3.9	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	BOD1L1	Q8NFC6	3051 aa		3.9	□□□□□ -1.78
NSMCE4A-208	ENST00000477289	CLEC18A	A5D8T8	446 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289		A6NNC1	897 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	BHLHE40	O14503	412 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	SURF4	O15260	269 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	SGCE	O43556	437 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	TLX2	O43763	284 aa	Predicted RBP	3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	SEC14L2	O76054	403 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	GLCE	O94923	617 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	SLC2A10	O95528	541 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	CLDN1	O95832	211 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	HRG	P04196	525 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	ALPL	P05186	524 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	CCNO	P22674	350 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	CRYGS	P22914	178 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	HSD11B1	P28845	292 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	GCH1	P30793	250 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	CDKN2A	P42771	156 aa	Known RBP	3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	RAD52	P43351	418 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	RGS6	P49758	472 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	IDH3G	P51553	393 aa	Predicted RBP	3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	SLC25A1	P53007	311 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	NUDT6	P53370	316 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	CDH11	P55287	796 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	UCP3	P55916	312 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	PPP2R2B	Q00005	443 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	CDK5	Q00535	292 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	TLE4	Q04727	773 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	FMOD	Q06828	376 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	ECH1	Q13011	328 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	TMED1	Q13445	227 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	IL18R1	Q13478	541 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	RIPK1	Q13546	671 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	CRMP1	Q14194	572 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	TSC22D1	Q15714	1073 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	HIST3H3	Q16695	136 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	ZNF260	Q3ZCT1	412 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	HIKESHI	Q53FT3	197 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	RNASE12	Q5GAN4	147 aa	Known RBP	3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	FAM27B	Q5VT28	67 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	SLX4IP	Q5VYV7	408 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	NXNL2	Q5VZ03	156 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	RUSC1-AS1	Q66K80	236 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	KRT80	Q6KB66	452 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	PLBD1	Q6P4A8	553 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	KCTD18	Q6PI47	426 aa	Predicted RBP	3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	SLC25A47	Q6Q0C1	308 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	CLEC18B	Q6UXF7	455 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	ERI1	Q8IV48	349 aa	Known RBP	3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	CPO	Q8IVL8	374 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	C8orf59	Q8N0T1	100 aa	Predicted RBP	3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	FBXL14	Q8N1E6	418 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	IQCF1	Q8N6M8	205 aa		3.9	□□□□□ -1.79
NSMCE4A-208	ENST00000477289	TCEANC	Q8N8B7	351 aa		3.9	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms