RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 OR4S1Q8NGB4 309 aa13.66□□□□□ -0.22
CLSTN1-205ENST00000477264 OR56B1Q8NGI3 324 aa13.66□□□□□ -0.22
CLSTN1-205ENST00000477264 MAFAQ8NHW3 353 aaPredicted RBP13.66□□□□□ -0.22
CLSTN1-205ENST00000477264 C3orf49Q96BT1 292 aa13.66□□□□□ -0.22
CLSTN1-205ENST00000477264 TSSK2Q96PF2 358 aa13.66□□□□□ -0.22
CLSTN1-205ENST00000477264 SCGB3A2Q96PL1 93 aa13.66□□□□□ -0.22
CLSTN1-205ENST00000477264 S100A13Q99584 98 aa13.66□□□□□ -0.22
CLSTN1-205ENST00000477264 CMKLR1Q99788 373 aa13.66□□□□□ -0.22
CLSTN1-205ENST00000477264 PRDM6Q9NQX0 595 aa13.66□□□□□ -0.22
CLSTN1-205ENST00000477264 CUTCQ9NTM9 273 aa13.66□□□□□ -0.22
CLSTN1-205ENST00000477264 GRHPRQ9UBQ7 328 aa13.66□□□□□ -0.22
CLSTN1-205ENST00000477264 CEACAM18A8MTB9 384 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 IFNA10P01566 189 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 IGFALSP35858 605 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 ZNF74Q16587 644 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 ZNF239Q16600 458 aaKnown RBP13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 AKIRIN2Q53H80 203 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 NSUN5P2Q63ZY6 315 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 TSTD1Q8NFU3 115 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 ZCCHC10Q8TBK6 192 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 CPNE4Q96A23 557 aaPredicted RBP13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 APOOQ9BUR5 198 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 FN3KRPQ9HA64 309 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 OR2S2Q9NQN1 319 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 TAS2R4Q9NYW5 299 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 STARD10Q9Y365 291 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 MPDZO75970 2070 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 FGF17O60258 216 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 SFT2D2O95562 160 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 SEMA4FO95754 770 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 SNRNP70P08621 437 aaKnown RBP13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 S100A2P29034 98 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 LSSP48449 732 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 ROM1Q03395 351 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 ODF4Q2M2E3 257 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 DEFB134Q4QY38 66 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 TMEM31Q5JXX7 168 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 OPN5Q6U736 354 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 Q6ZRG5 221 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 ASB5Q8WWX0 329 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 FBXO17Q96EF6 278 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 C2orf50Q96LR7 162 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 ELOVL3Q9HB03 270 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 SRA1Q9HD15 236 aaKnown RBP13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 GDF2Q9UK05 429 aaPredicted RBP13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 GTF2A1LQ9UNN4 478 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 FLVCR1Q9Y5Y0 555 aa13.65□□□□□ -0.22
CLSTN1-205ENST00000477264 TRIOO75962 3097 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 PRR19A6NJB7 356 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 ARGFXA6NJG6 315 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 JTBO76095 146 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 KLK3P07288 261 aaPredicted RBP13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 HNRNPA2B1P22626 353 aaKnown RBP13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 ITGA3P26006 1051 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 HRH1P35367 487 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 CDX1P47902 265 aaPredicted RBP13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 UCP2P55851 309 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 ID2Q02363 134 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 MESTQ5EB52 335 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 SLC18B1Q6NT16 456 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 ARRDC1Q8N5I2 433 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 SECTM1Q8WVN6 248 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 SLC22A18Q96BI1 424 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 SLC25A44Q96H78 314 aaPredicted RBP13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 G6PC3Q9BUM1 346 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 GFOD1Q9NXC2 390 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 ZNF346Q9UL40 294 aaKnown RBP13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 CYP8B1Q9UNU6 501 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 MRPS18BQ9Y676 258 aaKnown RBP13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 IGKV1D-42A0A075B6H8 117 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 C9JQL5 133 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 M0R036 132 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 KCNAB3O43448 404 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 CSTAP01040 98 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 DNASE1L1P49184 302 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 P2RY4P51582 365 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 FAM3AP98173 230 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 MOGAT2Q3SYC2 334 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 C9orf152Q5JTZ5 239 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 KCTD18Q6PI47 426 aaPredicted RBP13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 FIP1L1Q6UN15 594 aaKnown RBP13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 ETV3LQ6ZN32 361 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 FRMD1Q8N878 549 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 PNLDC1Q8NA58 520 aaKnown RBP13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 ZNF563Q8TA94 476 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 RNASE11Q8TAA1 199 aaKnown RBP13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 SNIP1Q8TAD8 396 aaKnown RBP13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 FOXQ1Q9C009 403 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 OR5AC2Q9NZP5 309 aa13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 TMEM184BQ9Y519 407 aaPredicted RBP13.64□□□□□ -0.23
CLSTN1-205ENST00000477264 LOC100509620A0A075B734 347 aa13.63□□□□□ -0.23
CLSTN1-205ENST00000477264 hCG_1809904A0A1W2PP81 198 aa13.63□□□□□ -0.23
CLSTN1-205ENST00000477264 A0A1W2PR64 198 aa13.63□□□□□ -0.23
CLSTN1-205ENST00000477264 A0A1W2PRV1 198 aa13.63□□□□□ -0.23
CLSTN1-205ENST00000477264 OR52A4PA6NMU1 304 aa13.63□□□□□ -0.23
CLSTN1-205ENST00000477264 DCTN6O00399 190 aa13.63□□□□□ -0.23
CLSTN1-205ENST00000477264 SERPINA5P05154 406 aa13.63□□□□□ -0.23
CLSTN1-205ENST00000477264 CT62P0C5K7 136 aa13.63□□□□□ -0.23
CLSTN1-205ENST00000477264 SULT1A1P50225 295 aa13.63□□□□□ -0.23
CLSTN1-205ENST00000477264 RIDAP52758 137 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms