RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 ARR3P36575 388 aa25.14■■□□□ 1.62
VEGFA-211ENST00000476772 TPTEP56180 551 aa25.14■■□□□ 1.62
VEGFA-211ENST00000476772 RAB1AP62820 205 aa25.14■■□□□ 1.62
VEGFA-211ENST00000476772 HGFACQ04756 655 aa25.14■■□□□ 1.62
VEGFA-211ENST00000476772 PMPCAQ10713 525 aa25.14■■□□□ 1.62
VEGFA-211ENST00000476772 TMEM53Q6P2H8 277 aa25.14■■□□□ 1.62
VEGFA-211ENST00000476772 OR51E1Q8TCB6 317 aa25.14■■□□□ 1.62
VEGFA-211ENST00000476772 ASB5Q8WWX0 329 aa25.14■■□□□ 1.62
VEGFA-211ENST00000476772 SFXN3Q9BWM7 321 aa25.14■■□□□ 1.62
VEGFA-211ENST00000476772 CXorf56Q9H5V9 222 aa25.14■■□□□ 1.62
VEGFA-211ENST00000476772 TSC22D1Q15714 1073 aa25.13■■□□□ 1.61
VEGFA-211ENST00000476772 GABRA6Q16445 453 aa25.13■■□□□ 1.61
VEGFA-211ENST00000476772 DRAM2Q6UX65 266 aa25.13■■□□□ 1.61
VEGFA-211ENST00000476772 LUZP2Q86TE4 346 aa25.13■■□□□ 1.61
VEGFA-211ENST00000476772 NR2C2APQ86WQ0 139 aa25.13■■□□□ 1.61
VEGFA-211ENST00000476772 NANOS1Q8WY41 292 aaKnown RBP25.13■■□□□ 1.61
VEGFA-211ENST00000476772 KCNS3Q9BQ31 491 aa25.13■■□□□ 1.61
VEGFA-211ENST00000476772 SRMP19623 302 aa25.13■■□□□ 1.61
VEGFA-211ENST00000476772 DPPA2Q7Z7J5 298 aa25.13■■□□□ 1.61
VEGFA-211ENST00000476772 TPRA1Q86W33 373 aa25.13■■□□□ 1.61
VEGFA-211ENST00000476772 THRSPQ92748 146 aa25.13■■□□□ 1.61
VEGFA-211ENST00000476772 B3GNT2Q9NY97 397 aa25.13■■□□□ 1.61
VEGFA-211ENST00000476772 PLEKHB1Q9UF11 243 aaPredicted RBP25.13■■□□□ 1.61
VEGFA-211ENST00000476772 ATPIF1Q9UII2 106 aa25.13■■□□□ 1.61
VEGFA-211ENST00000476772 A0A1B0GTI1 187 aa25.12■■□□□ 1.61
VEGFA-211ENST00000476772 APEX1P27695 318 aaKnown RBP25.12■■□□□ 1.61
VEGFA-211ENST00000476772 OR10A3P58181 314 aa25.12■■□□□ 1.61
VEGFA-211ENST00000476772 OR13C3Q8NGS6 347 aa25.12■■□□□ 1.61
VEGFA-211ENST00000476772 C6orf62Q9GZU0 229 aaPredicted RBP25.12■■□□□ 1.61
VEGFA-211ENST00000476772 MMP27Q9H306 513 aa25.12■■□□□ 1.61
VEGFA-211ENST00000476772 A3GALT2U3KPV4 340 aa25.12■■□□□ 1.61
VEGFA-211ENST00000476772 ANKRD61A6NGH8 418 aa25.11■■□□□ 1.61
VEGFA-211ENST00000476772 SYT7O43581 403 aa25.11■■□□□ 1.61
VEGFA-211ENST00000476772 RAF1P04049 648 aa25.11■■□□□ 1.61
VEGFA-211ENST00000476772 GSG1Q2KHT4 349 aa25.11■■□□□ 1.61
VEGFA-211ENST00000476772 GFOD2Q3B7J2 385 aa25.11■■□□□ 1.61
VEGFA-211ENST00000476772 BEND4Q6ZU67 534 aa25.11■■□□□ 1.61
VEGFA-211ENST00000476772 NCCRP1Q6ZVX7 275 aaPredicted RBP25.11■■□□□ 1.61
VEGFA-211ENST00000476772 CXorf67Q86X51 503 aaPredicted RBP25.11■■□□□ 1.61
VEGFA-211ENST00000476772 GPR84Q9NQS5 396 aa25.11■■□□□ 1.61
VEGFA-211ENST00000476772 A0A1B0GVI7 797 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 TBX1O43435 398 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 LMX1BO60663 402 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 RAB3BP20337 219 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 PAX7P23759 505 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 SNAI3Q3KNW1 292 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 PKD1L2Q7Z442 2459 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 MDP1Q86V88 176 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 COMMD2Q86X83 199 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 SOX7Q9BT81 388 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 RTTNQ86VV8 2226 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 LOC100509620A0A075B734 347 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 A0A0G2JNJ9 132 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 COX5BP10606 129 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 ZNF584Q8IVC4 421 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 ST6GALNAC3Q8NDV1 305 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 C1orf162Q8NEQ5 155 aaPredicted RBP25.1■■□□□ 1.61
VEGFA-211ENST00000476772 OR6Q1Q8NGQ2 317 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 TCF7L1Q9HCS4 588 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 Q9UFV3 132 aa25.1■■□□□ 1.61
VEGFA-211ENST00000476772 ATRXP46100 2492 aa25.09■■□□□ 1.61
VEGFA-211ENST00000476772 TRAV8-7A0A075B6U6 113 aa25.09■■□□□ 1.61
VEGFA-211ENST00000476772 ARPC4-TTLL3A0A0A6YYG9 625 aa25.09■■□□□ 1.61
VEGFA-211ENST00000476772 A0A0G2JK05 382 aa25.09■■□□□ 1.61
VEGFA-211ENST00000476772 A0A1W2PR80 420 aa25.09■■□□□ 1.61
VEGFA-211ENST00000476772 CD2P06729 351 aa25.09■■□□□ 1.61
VEGFA-211ENST00000476772 BMXP51813 675 aa25.09■■□□□ 1.61
VEGFA-211ENST00000476772 UBE2NP61088 152 aaKnown RBP25.09■■□□□ 1.61
VEGFA-211ENST00000476772 AK6Q9Y3D8 172 aaKnown RBP25.09■■□□□ 1.61
VEGFA-211ENST00000476772 A0A075B6Q4 140 aa25.08■■□□□ 1.61
VEGFA-211ENST00000476772 IQCMA0A1B0GVH7 501 aa25.08■■□□□ 1.61
VEGFA-211ENST00000476772 IGLV3-1P01715 115 aa25.08■■□□□ 1.61
VEGFA-211ENST00000476772 CCL1P22362 96 aa25.08■■□□□ 1.61
VEGFA-211ENST00000476772 PEX19P40855 299 aa25.08■■□□□ 1.61
VEGFA-211ENST00000476772 PLP2Q04941 152 aa25.08■■□□□ 1.61
VEGFA-211ENST00000476772 P2RY6Q15077 328 aa25.08■■□□□ 1.61
VEGFA-211ENST00000476772 CEP78Q5JTW2 689 aa25.08■■□□□ 1.61
VEGFA-211ENST00000476772 ASPHD2Q6ICH7 369 aa25.08■■□□□ 1.61
VEGFA-211ENST00000476772 ZNF474Q6S9Z5 364 aaPredicted RBP25.08■■□□□ 1.61
VEGFA-211ENST00000476772 STAC2Q6ZMT1 411 aa25.08■■□□□ 1.61
VEGFA-211ENST00000476772 BOD1Q96IK1 185 aa25.08■■□□□ 1.61
VEGFA-211ENST00000476772 LYZL4Q96KX0 146 aa25.08■■□□□ 1.61
VEGFA-211ENST00000476772 SMURF1Q9HCE7 757 aa25.08■■□□□ 1.61
VEGFA-211ENST00000476772 SHANK1Q9Y566 2161 aa25.08■■□□□ 1.61
VEGFA-211ENST00000476772 A0A0U1RQV5 110 aa25.07■■□□□ 1.6
VEGFA-211ENST00000476772 LCATP04180 440 aa25.07■■□□□ 1.6
VEGFA-211ENST00000476772 STOMP27105 288 aa25.07■■□□□ 1.6
VEGFA-211ENST00000476772 OPRM1P35372 400 aa25.07■■□□□ 1.6
VEGFA-211ENST00000476772 CCDC36Q8IYA8 594 aa25.07■■□□□ 1.6
VEGFA-211ENST00000476772 OR52H1Q8NGJ2 320 aa25.07■■□□□ 1.6
VEGFA-211ENST00000476772 FAM71F1Q96KD3 344 aaPredicted RBP25.07■■□□□ 1.6
VEGFA-211ENST00000476772 ZNF75AQ96N20 296 aa25.07■■□□□ 1.6
VEGFA-211ENST00000476772 SLITRK2Q9H156 845 aa25.07■■□□□ 1.6
VEGFA-211ENST00000476772 OR10A2Q9H208 303 aa25.07■■□□□ 1.6
VEGFA-211ENST00000476772 ZNF275Q9NSD4 429 aaPredicted RBP25.07■■□□□ 1.6
VEGFA-211ENST00000476772 SPTA1P02549 2419 aa25.07■■□□□ 1.6
VEGFA-211ENST00000476772 CCL2P13500 99 aa25.07■■□□□ 1.6
VEGFA-211ENST00000476772 BMP5P22003 454 aa25.07■■□□□ 1.6
VEGFA-211ENST00000476772 SFXN4Q6P4A7 337 aa25.07■■□□□ 1.6
VEGFA-211ENST00000476772 MS4A3Q96HJ5 214 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms