RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 MRPS17Q9Y2R5 130 aaKnown RBP5.36□□□□□ -1.55
ECHDC1-215ENST00000475319 NME7Q9Y5B8 376 aa5.36□□□□□ -1.55
ECHDC1-215ENST00000475319 URGCP-MRPS24S4R325 110 aa5.36□□□□□ -1.55
ECHDC1-215ENST00000475319 KDM3BQ7LBC6 1761 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 IGHV2OR16-5A0A0B4J2B6 119 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 RNF222A6NCQ9 220 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 OR6C76A6NM76 312 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 YDJCA8MPS7 323 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 F5H5P2 479 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 RNASEK-C17orf49H0YIS7 233 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 HOXA3O43365 443 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 RAD51DO75771 328 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 SCELO95171 688 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 LCATP04180 440 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 CD14P08571 375 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 BCKDHAP12694 445 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 GPX3P22352 226 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 AK4P27144 223 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 PSMB5P28074 263 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 CD1CP29017 333 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 NTSR1P30989 418 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 RFX3P48380 749 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 NPY4RP50391 375 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 DVL1P1P54792 670 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 CDH12P55289 794 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 BACE1P56817 501 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 CKS1BP61024 79 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 H3F3AP84243 136 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 FAM3AP98173 230 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 BAXQ07812 192 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 AESQ08117 197 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 TMEM132DQ14C87 1099 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 EBPQ15125 230 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 NSDHLQ15738 373 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 SNRNP35Q16560 246 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 C18orf21Q32NC0 220 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 AWAT1Q58HT5 328 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 ZNF789Q5FWF6 425 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 TFDP3Q5H9I0 405 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 COA6Q5JTJ3 125 aaKnown RBP5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 PHYHD1Q5SRE7 291 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 TMEM268Q5VZI3 342 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 GLDNQ6ZMI3 551 aaPredicted RBP5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 TMEM91Q6ZNR0 172 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 ACOT7LQ6ZUV0 252 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 GLT6D1Q7Z4J2 308 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 DEFB128Q7Z7B8 93 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 BLIDQ8IZY5 108 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 CFAP52Q8N1V2 620 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 HORMAD2Q8N7B1 307 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 RNF149Q8NC42 400 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 MDGA1Q8NFP4 955 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 SLC7A13Q8TCU3 470 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 FAM151AQ8WW52 585 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 NTNG2Q96CW9 530 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 HARBI1Q96MB7 349 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 LYSMD1Q96S90 227 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 SPATA25Q9BR10 227 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 CHIAQ9BZP6 476 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 MEGF9Q9H1U4 602 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 ZDHHC6Q9H6R6 413 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 FN3KRPQ9HA64 309 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 IL21RQ9HBE5 538 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 NMRAL1Q9HBL8 299 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 HHATLQ9HCP6 504 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 SEMA4GQ9NTN9 838 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 MTCH1Q9NZJ7 389 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 OR5AC2Q9NZP5 309 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 FOXJ3Q9UPW0 622 aa5.35□□□□□ -1.55
ECHDC1-215ENST00000475319 OTOFQ9HC10 1997 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 hCG_1818297A0A087WSY0 165 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 SMIM30A4D0T7 59 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 NKX2-6A6NCS4 301 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 TVP23AA6NH52 213 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 DHRS7CA6NNS2 312 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 ADAM20O43506 726 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 OR7C2O60412 319 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 SAP30O75446 220 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 EEDO75530 441 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 SCGB2A1O75556 95 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 REM1O75628 298 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 CER1O95813 267 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 TXNDC12O95881 172 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 MBPP02686 304 aaPredicted RBP5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 PLA2G1BP04054 148 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 HLA-DOAP06340 250 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 OR5G3P0C626 314 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 OR8U9P0C7N5 309 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 SMIM10L1P0DMW3 83 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 OR13C7P0DN81 318 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 TMEM225BP0DP42 221 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 HGFP14210 728 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 SSTR5P35346 364 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 FOXL2P58012 376 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 RPS13P62277 151 aaKnown RBP5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 EFNB1P98172 346 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 ARHGAP1Q07960 439 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 ST3GAL4Q11206 333 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 MAMLD1Q13495 774 aa5.34□□□□□ -1.55
ECHDC1-215ENST00000475319 FHL3Q13643 280 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms