RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 SPANXB1Q9NS25 103 aaPredicted RBP5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 FOXJ2Q9P0K8 574 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 FAM96BQ9Y3D0 163 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 NEDD4P46934 1319 aa5.38□□□□□ -1.55
SMARCE1-208ENST00000474246 SLC22A20A6NK97 555 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 PRSS46E5RG02 174 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 CA11O75493 328 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 RAB36O95755 333 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 CSN3P07498 182 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 GIPP09681 153 aaPredicted RBP5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 SLC35G4P0C7Q5 338 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF250P15622 560 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF30P17039 623 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 ALOX5APP20292 161 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 FCARP24071 287 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 UBE2MP61081 183 aaKnown RBP5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 METRNLQ641Q3 311 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 STEAP4Q687X5 459 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 ZNF776Q68DI1 518 aaPredicted RBP5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 RNF165Q6ZSG1 346 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 TMPPEQ6ZT21 453 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 MDGA2Q7Z553 956 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 ACOT1Q86TX2 421 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 TMEM130Q8N3G9 435 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 ACOT4Q8N9L9 421 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 OR4M2Q8NGB6 313 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 OR5J2Q8NH18 312 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 GNPDA2Q8TDQ7 276 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 DCAKDQ8WVC6 231 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 HPSE2Q8WWQ2 592 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 ACOT12Q8WYK0 555 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 PAGE5Q96GU1 130 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 GPR78Q96P69 363 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 URM1Q9BTM9 101 aaKnown RBP5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 HCAR1Q9BXC0 346 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 FOXQ1Q9C009 403 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 TKTL2Q9H0I9 626 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 BPIFA1Q9NP55 256 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 MYOTQ9UBF9 498 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 SNX12Q9UMY4 172 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 SLC17A4Q9Y2C5 497 aa5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 ARHGEF17Q96PE2 2063 aaPredicted RBP5.37□□□□□ -1.55
SMARCE1-208ENST00000474246 TGIF2-C20orf24A0A0A6YYL0 155 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 TRBV9A0A0B4J1U6 114 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 A0A1B0GUS0 222 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 SPAARA0A1B0GVQ0 90 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 CCDC182A6NF36 153 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 ANKUB1A6NFN9 424 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 ARL5CA6NH57 179 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 F6UZH7 168 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 C15orf65H3BRN8 121 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 DNASE2O00115 360 aaPredicted RBP5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 EI24O14681 340 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 CHEK1O14757 476 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 RFPL2O75678 378 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 GADD45GO95257 159 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 TIAF1O95411 115 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 IGHG3P01860 377 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 TYMSP04818 313 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 DBHP09172 617 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 CSF3P09919 207 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 DUSP1P28562 367 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 DCTP40126 519 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 TCTAP57738 103 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 ERVFRD-1P60508 538 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 RAB5BP61020 215 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 GAB1Q13480 694 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 GABRA6Q16445 453 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 MICAQ29983 383 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 RPEL1Q2QD12 228 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 PYCR3Q53H96 274 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 OCIAD2Q56VL3 154 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 TMEM128Q5BJH2 165 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 OTUD1Q5VV17 481 aaPredicted RBP5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 HIST2H2BDQ6DRA6 164 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 PRR27Q6MZM9 219 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 RAD9BQ6WBX8 426 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 LINC00336Q6ZUF6 198 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 RBM23Q86U06 439 aaKnown RBP5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 TMPRSS12Q86WS5 348 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 IGDCC3Q8IVU1 814 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 BAP18Q8IXM2 172 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 ARIH2OSQ8N7S6 290 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 OR56A4Q8NGH8 313 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 OR51S1Q8NGJ8 323 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 OR13G1Q8NGZ3 307 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 OR1F12Q8NHA8 337 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 RBPMSQ93062 196 aaKnown RBP5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 CMBLQ96DG6 245 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 SMARCD1Q96GM5 515 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 ZBTB45Q96K62 511 aaPredicted RBP5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 KLHL32Q96NJ5 620 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 AGAP4Q96P64 663 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 TBX5Q99593 518 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 ATF6BQ99941 703 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 LRTM1Q9HBL6 345 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 MED9Q9NWA0 146 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 SS18L2Q9UHA2 77 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 LGALS13Q9UHV8 139 aa5.36□□□□□ -1.55
SMARCE1-208ENST00000474246 SLC45A2Q9UMX9 530 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms