RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 ZNF511Q8NB15 262 aa15.92■□□□□ 0.14
CCDC171-206ENST00000474193 BBS1Q8NFJ9 593 aa15.92■□□□□ 0.14
CCDC171-206ENST00000474193 MSI2Q96DH6 328 aaKnown RBP15.92■□□□□ 0.14
CCDC171-206ENST00000474193 ZMYND19Q96E35 227 aaPredicted RBP15.92■□□□□ 0.14
CCDC171-206ENST00000474193 INTS14Q96SY0 518 aa15.92■□□□□ 0.14
CCDC171-206ENST00000474193 TEAD3Q99594 435 aa15.92■□□□□ 0.14
CCDC171-206ENST00000474193 CLN6Q9NWW5 311 aa15.92■□□□□ 0.14
CCDC171-206ENST00000474193 PLEK2Q9NYT0 353 aa15.92■□□□□ 0.14
CCDC171-206ENST00000474193 CGGBP1Q9UFW8 167 aaPredicted RBP15.92■□□□□ 0.14
CCDC171-206ENST00000474193 LRP5LA4QPB2 252 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 ZNF593O00488 134 aaPredicted RBP15.91■□□□□ 0.14
CCDC171-206ENST00000474193 DLGAP1O14490 977 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 PPIHO43447 177 aaKnown RBP15.91■□□□□ 0.14
CCDC171-206ENST00000474193 LILRA1O75019 489 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 SPARCP09486 303 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 FAM157CP0CG43 387 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 PCMT1P22061 227 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 COL8A2P25067 703 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 HSPA13P48723 471 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 ZNF81P51508 661 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 CCL8P80075 99 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 ELFN2Q5R3F8 820 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 SHFQ7M4L6 423 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 LINC01356Q8N9X3 169 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 SLC25A40Q8TBP6 338 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 ZNRF4Q8WWF5 429 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 OR2J1Q9GZK6 312 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 EGLN1Q9GZT9 426 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 RASSF4Q9H2L5 321 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 MRPL22Q9NWU5 206 aaKnown RBP15.91■□□□□ 0.14
CCDC171-206ENST00000474193 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.91■□□□□ 0.14
CCDC171-206ENST00000474193 COMMD3-BMI1R4GMX3 469 aa15.91■□□□□ 0.14
CCDC171-206ENST00000474193 E9PQ18 207 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 SLC2A5P22732 501 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 ATP6V1E1P36543 226 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 WNT5AP41221 380 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 AQP4P55087 323 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 SNCBQ16143 134 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 SLC25A30Q5SVS4 291 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 SPATA46Q5T0L3 261 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 LINC01590Q5TEZ4 76 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 AADACL4Q5VUY2 407 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 MBNL2Q5VZF2 373 aaKnown RBP15.9■□□□□ 0.14
CCDC171-206ENST00000474193 OTPQ5XKR4 325 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 IZUMO2Q6UXV1 221 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 BCDIN3DQ7Z5W3 292 aaKnown RBP15.9■□□□□ 0.14
CCDC171-206ENST00000474193 ZNF101Q8IZC7 436 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 OR6N2Q8NGY6 317 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 KLF14Q8TD94 323 aaPredicted RBP15.9■□□□□ 0.14
CCDC171-206ENST00000474193 MARS2Q96GW9 593 aaKnown RBP15.9■□□□□ 0.14
CCDC171-206ENST00000474193 ZNF582Q96NG8 517 aaPredicted RBP15.9■□□□□ 0.14
CCDC171-206ENST00000474193 DIRC2Q96SL1 478 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 WDR76Q9H967 626 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 TBCCD1Q9NVR7 557 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 DNAJC27Q9NZQ0 273 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 WARS2Q9UGM6 360 aaKnown RBP15.9■□□□□ 0.14
CCDC171-206ENST00000474193 GRIP1Q9Y3R0 1128 aa15.9■□□□□ 0.14
CCDC171-206ENST00000474193 KIAA1324LA8MWY0 1029 aaPredicted RBP15.89■□□□□ 0.13
CCDC171-206ENST00000474193 HTR1FP30939 366 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 MAGEB1P43366 347 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 ADARB1P78563 741 aaKnown RBP15.89■□□□□ 0.13
CCDC171-206ENST00000474193 POU4F2Q12837 409 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 TMED1Q13445 227 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 OCLNQ16625 522 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 TSTQ16762 297 aaKnown RBP15.89■□□□□ 0.13
CCDC171-206ENST00000474193 HFEQ30201 348 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 TEX30Q5JUR7 227 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 ZNF691Q5VV52 312 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 LINC00346Q8IVM7 164 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 ENTHD1Q8IYW4 607 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 C8orf59Q8N0T1 100 aaPredicted RBP15.89■□□□□ 0.13
CCDC171-206ENST00000474193 OR5L1Q8NGL2 311 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 RHOXF1Q8NHV9 184 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 UBE2FQ969M7 185 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 ELMOD3Q96FG2 381 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 TIMD4Q96H15 378 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 CNN2Q99439 309 aaKnown RBP15.89■□□□□ 0.13
CCDC171-206ENST00000474193 SAP30LQ9HAJ7 183 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 ZNF275Q9NSD4 429 aaPredicted RBP15.89■□□□□ 0.13
CCDC171-206ENST00000474193 CYB5R1Q9UHQ9 305 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 ZDHHC8Q9ULC8 765 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 LHFPL6Q9Y693 200 aa15.89■□□□□ 0.13
CCDC171-206ENST00000474193 IGHV1-69-2A0A0G2JMI3 117 aa15.88■□□□□ 0.13
CCDC171-206ENST00000474193 RER1O15258 196 aa15.88■□□□□ 0.13
CCDC171-206ENST00000474193 TIMM8AO60220 97 aaPredicted RBP15.88■□□□□ 0.13
CCDC171-206ENST00000474193 ICMTO60725 284 aa15.88■□□□□ 0.13
CCDC171-206ENST00000474193 CDC14BO60729 498 aa15.88■□□□□ 0.13
CCDC171-206ENST00000474193 NAA10P41227 235 aaPredicted RBP15.88■□□□□ 0.13
CCDC171-206ENST00000474193 CRYBB2P43320 205 aa15.88■□□□□ 0.13
CCDC171-206ENST00000474193 RGS6P49758 472 aa15.88■□□□□ 0.13
CCDC171-206ENST00000474193 SLC3A1Q07837 685 aa15.88■□□□□ 0.13
CCDC171-206ENST00000474193 SLC18B1Q6NT16 456 aa15.88■□□□□ 0.13
CCDC171-206ENST00000474193 CORO6Q6QEF8 472 aa15.88■□□□□ 0.13
CCDC171-206ENST00000474193 LYPD4Q6UWN0 246 aa15.88■□□□□ 0.13
CCDC171-206ENST00000474193 SLC16A9Q7RTY1 509 aa15.88■□□□□ 0.13
CCDC171-206ENST00000474193 ZNF454Q8N9F8 522 aa15.88■□□□□ 0.13
CCDC171-206ENST00000474193 IPCEF1Q8WWN9 437 aaPredicted RBP15.88■□□□□ 0.13
CCDC171-206ENST00000474193 DCLRE1CQ96SD1 692 aaKnown RBP15.88■□□□□ 0.13
CCDC171-206ENST00000474193 HDHD2Q9H0R4 259 aa15.88■□□□□ 0.13
CCDC171-206ENST00000474193 MARCH7Q9H992 704 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms