RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 BLVRAP53004 296 aa17.12■□□□□ 0.33
APP-215ENST00000474136 ERVS71-1P61550 626 aa17.12■□□□□ 0.33
APP-215ENST00000474136 LCN2P80188 198 aa17.12■□□□□ 0.33
APP-215ENST00000474136 CRMP1Q14194 572 aa17.12■□□□□ 0.33
APP-215ENST00000474136 TUSC1Q2TAM9 212 aa17.12■□□□□ 0.33
APP-215ENST00000474136 MESTQ5EB52 335 aa17.12■□□□□ 0.33
APP-215ENST00000474136 THEM4Q5T1C6 240 aa17.12■□□□□ 0.33
APP-215ENST00000474136 LEG1Q6P5S2 330 aa17.12■□□□□ 0.33
APP-215ENST00000474136 TMEM154Q6P9G4 183 aa17.12■□□□□ 0.33
APP-215ENST00000474136 RBMS3Q6XE24 437 aaKnown RBP17.12■□□□□ 0.33
APP-215ENST00000474136 CPOQ8IVL8 374 aa17.12■□□□□ 0.33
APP-215ENST00000474136 PAQR4Q8N4S7 273 aaPredicted RBP17.12■□□□□ 0.33
APP-215ENST00000474136 OR2T4Q8NH00 348 aa17.12■□□□□ 0.33
APP-215ENST00000474136 UBE2FQ969M7 185 aa17.12■□□□□ 0.33
APP-215ENST00000474136 NMNAT3Q96T66 252 aa17.12■□□□□ 0.33
APP-215ENST00000474136 FOXB1Q99853 325 aa17.12■□□□□ 0.33
APP-215ENST00000474136 PLCXD1Q9NUJ7 323 aa17.12■□□□□ 0.33
APP-215ENST00000474136 VSX1Q9NZR4 365 aaPredicted RBP17.12■□□□□ 0.33
APP-215ENST00000474136 TRMUO75648 421 aaKnown RBP17.11■□□□□ 0.33
APP-215ENST00000474136 CCDC159P0C7I6 412 aa17.11■□□□□ 0.33
APP-215ENST00000474136 CCL2P13500 99 aa17.11■□□□□ 0.33
APP-215ENST00000474136 CDKN2AP42771 156 aaKnown RBP17.11■□□□□ 0.33
APP-215ENST00000474136 CLRN1P58418 232 aa17.11■□□□□ 0.33
APP-215ENST00000474136 CAMK2DQ13557 499 aa17.11■□□□□ 0.33
APP-215ENST00000474136 SLC35D3Q5M8T2 416 aa17.11■□□□□ 0.33
APP-215ENST00000474136 AADACL4Q5VUY2 407 aa17.11■□□□□ 0.33
APP-215ENST00000474136 DOK3Q7L591 496 aa17.11■□□□□ 0.33
APP-215ENST00000474136 BCL6BQ8N143 479 aaPredicted RBP17.11■□□□□ 0.33
APP-215ENST00000474136 SDR9C7Q8NEX9 313 aa17.11■□□□□ 0.33
APP-215ENST00000474136 DDOQ99489 341 aa17.11■□□□□ 0.33
APP-215ENST00000474136 MRPL13Q9BYD1 178 aaKnown RBP17.11■□□□□ 0.33
APP-215ENST00000474136 ULBP2Q9BZM5 246 aa17.11■□□□□ 0.33
APP-215ENST00000474136 B3GAT2Q9NPZ5 323 aa17.11■□□□□ 0.33
APP-215ENST00000474136 ZNF69Q9UC07 566 aa17.11■□□□□ 0.33
APP-215ENST00000474136 TPRKBQ9Y3C4 175 aa17.11■□□□□ 0.33
APP-215ENST00000474136 RPL36Q9Y3U8 105 aaKnown RBP17.11■□□□□ 0.33
APP-215ENST00000474136 NOTCH1P46531 2555 aa17.1■□□□□ 0.33
APP-215ENST00000474136 IRGMA1A4Y4 181 aa17.1■□□□□ 0.33
APP-215ENST00000474136 SLC22A31A6NKX4 558 aa17.1■□□□□ 0.33
APP-215ENST00000474136 CLDN25C9JDP6 229 aa17.1■□□□□ 0.33
APP-215ENST00000474136 UBL3O95164 117 aa17.1■□□□□ 0.33
APP-215ENST00000474136 SLC2A10O95528 541 aa17.1■□□□□ 0.33
APP-215ENST00000474136 SERPINA5P05154 406 aa17.1■□□□□ 0.33
APP-215ENST00000474136 GATA3P23771 443 aa17.1■□□□□ 0.33
APP-215ENST00000474136 MELKQ14680 651 aa17.1■□□□□ 0.33
APP-215ENST00000474136 PCGF3Q3KNV8 242 aa17.1■□□□□ 0.33
APP-215ENST00000474136 PLBD1Q6P4A8 553 aa17.1■□□□□ 0.33
APP-215ENST00000474136 SKA3Q8IX90 412 aa17.1■□□□□ 0.33
APP-215ENST00000474136 OR6N1Q8NGY5 312 aa17.1■□□□□ 0.33
APP-215ENST00000474136 CNIH3Q8TBE1 160 aa17.1■□□□□ 0.33
APP-215ENST00000474136 PTP4A1Q93096 173 aa17.1■□□□□ 0.33
APP-215ENST00000474136 OTULINQ96BN8 352 aa17.1■□□□□ 0.33
APP-215ENST00000474136 NMNAT2Q9BZQ4 307 aa17.1■□□□□ 0.33
APP-215ENST00000474136 UBAP1Q9NZ09 502 aa17.1■□□□□ 0.33
APP-215ENST00000474136 WARS2Q9UGM6 360 aaKnown RBP17.1■□□□□ 0.33
APP-215ENST00000474136 IGLV3-9A0A075B6K5 115 aa17.09■□□□□ 0.33
APP-215ENST00000474136 SLC22A23A1A5C7 686 aa17.09■□□□□ 0.33
APP-215ENST00000474136 OR6C68A6NDL8 312 aa17.09■□□□□ 0.33
APP-215ENST00000474136 TPD52L2O43399 206 aaKnown RBP17.09■□□□□ 0.33
APP-215ENST00000474136 WBP4O75554 376 aaKnown RBP17.09■□□□□ 0.33
APP-215ENST00000474136 TNFAIP8O95379 198 aa17.09■□□□□ 0.33
APP-215ENST00000474136 PGA4P0DJD7 388 aa17.09■□□□□ 0.33
APP-215ENST00000474136 PGA3P0DJD8 388 aa17.09■□□□□ 0.33
APP-215ENST00000474136 KLF3P57682 345 aaPredicted RBP17.09■□□□□ 0.33
APP-215ENST00000474136 GLO1Q04760 184 aa17.09■□□□□ 0.33
APP-215ENST00000474136 TSTQ16762 297 aaKnown RBP17.09■□□□□ 0.33
APP-215ENST00000474136 LCN1P1Q5VSP4 162 aa17.09■□□□□ 0.33
APP-215ENST00000474136 MEPCEQ7L2J0 689 aaKnown RBP17.09■□□□□ 0.33
APP-215ENST00000474136 CYB561A3Q8NBI2 242 aa17.09■□□□□ 0.33
APP-215ENST00000474136 NOXO1Q8NFA2 376 aa17.09■□□□□ 0.33
APP-215ENST00000474136 SYNPRQ8TBG9 265 aa17.09■□□□□ 0.33
APP-215ENST00000474136 SNX33Q8WV41 574 aa17.09■□□□□ 0.33
APP-215ENST00000474136 ZNF48Q96MX3 618 aaPredicted RBP17.09■□□□□ 0.33
APP-215ENST00000474136 ZNF582Q96NG8 517 aaPredicted RBP17.09■□□□□ 0.33
APP-215ENST00000474136 GAL3ST1Q99999 423 aa17.09■□□□□ 0.33
APP-215ENST00000474136 NKIRAS2Q9NYR9 191 aa17.09■□□□□ 0.33
APP-215ENST00000474136 MYRFQ9Y2G1 1151 aa17.09■□□□□ 0.33
APP-215ENST00000474136 M0R129 80 aa17.08■□□□□ 0.32
APP-215ENST00000474136 ENTPD6O75354 484 aa17.08■□□□□ 0.32
APP-215ENST00000474136 ZNF250P15622 560 aa17.08■□□□□ 0.32
APP-215ENST00000474136 HTR1FP30939 366 aa17.08■□□□□ 0.32
APP-215ENST00000474136 CSNK1A1P48729 337 aa17.08■□□□□ 0.32
APP-215ENST00000474136 SELENOVP59797 346 aa17.08■□□□□ 0.32
APP-215ENST00000474136 POU4F2Q12837 409 aa17.08■□□□□ 0.32
APP-215ENST00000474136 BAMBIQ13145 260 aa17.08■□□□□ 0.32
APP-215ENST00000474136 HNRNPA0Q13151 305 aaKnown RBP17.08■□□□□ 0.32
APP-215ENST00000474136 HIST3H3Q16695 136 aa17.08■□□□□ 0.32
APP-215ENST00000474136 KLHL22Q53GT1 634 aa17.08■□□□□ 0.32
APP-215ENST00000474136 ZBTB46Q86UZ6 589 aa17.08■□□□□ 0.32
APP-215ENST00000474136 SLC30A7Q8NEW0 376 aa17.08■□□□□ 0.32
APP-215ENST00000474136 APH1BQ8WW43 257 aa17.08■□□□□ 0.32
APP-215ENST00000474136 RAB1CQ92928 201 aa17.08■□□□□ 0.32
APP-215ENST00000474136 SYT4Q9H2B2 425 aa17.08■□□□□ 0.32
APP-215ENST00000474136 RPRD1BQ9NQG5 326 aaKnown RBP17.08■□□□□ 0.32
APP-215ENST00000474136 DECR2Q9NUI1 292 aa17.08■□□□□ 0.32
APP-215ENST00000474136 HAO2Q9NYQ3 351 aa17.08■□□□□ 0.32
APP-215ENST00000474136 GLTPQ9NZD2 209 aa17.08■□□□□ 0.32
APP-215ENST00000474136 GPR160Q9UJ42 338 aa17.08■□□□□ 0.32
APP-215ENST00000474136 EFCAB10A6NFE3 127 aa17.07■□□□□ 0.32
APP-215ENST00000474136 FAM183AA6NL82 134 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms