RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 OR2T29Q8NH02 315 aa7.59□□□□□ -1.19
USF1-204ENST00000472217 ZNF420Q8TAQ5 688 aaPredicted RBP7.59□□□□□ -1.19
USF1-204ENST00000472217 ZNF418Q8TF45 676 aaPredicted RBP7.59□□□□□ -1.19
USF1-204ENST00000472217 CCDC124Q96CT7 223 aaKnown RBP7.59□□□□□ -1.19
USF1-204ENST00000472217 MEGF10Q96KG7 1140 aa7.59□□□□□ -1.19
USF1-204ENST00000472217 SLC30A2Q9BRI3 323 aa7.59□□□□□ -1.19
USF1-204ENST00000472217 TSSK6Q9BXA6 273 aa7.59□□□□□ -1.19
USF1-204ENST00000472217 HCAR1Q9BXC0 346 aa7.59□□□□□ -1.19
USF1-204ENST00000472217 C7orf69Q9H7B7 122 aa7.59□□□□□ -1.19
USF1-204ENST00000472217 TBC1D23Q9NUY8 699 aa7.59□□□□□ -1.19
USF1-204ENST00000472217 ARMC1Q9NVT9 282 aa7.59□□□□□ -1.19
USF1-204ENST00000472217 OPN4Q9UHM6 478 aa7.59□□□□□ -1.19
USF1-204ENST00000472217 SAMHD1Q9Y3Z3 626 aaKnown RBP7.59□□□□□ -1.19
USF1-204ENST00000472217 COMMD3-BMI1R4GMX3 469 aa7.59□□□□□ -1.19
USF1-204ENST00000472217 U3KQV3 271 aa7.59□□□□□ -1.19
USF1-204ENST00000472217 PPIAL4EA0A075B759 164 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 PPIAL4CA0A0B4J2A2 164 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 IGHV3-64DA0A0J9YX35 117 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 A8MXK9 166 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 F5H0A9 414 aaPredicted RBP7.58□□□□□ -1.2
USF1-204ENST00000472217 PPIAL4DF5H284 164 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 IFNL4K9M1U5 179 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 M0R135 149 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 ZNF205O95201 554 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 CYB5R3P00387 301 aaPredicted RBP7.58□□□□□ -1.2
USF1-204ENST00000472217 FSHBP01225 129 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 LCATP04180 440 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 HLA-DPB1P04440 258 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 GYPBP06028 91 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 PPIAL4FP0DN26 164 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 SELEP16581 610 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 SPI1P17947 270 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 MDH2P40926 338 aaKnown RBP7.58□□□□□ -1.2
USF1-204ENST00000472217 SLC6A9P48067 706 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 TPTEP56180 551 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 MALLQ13021 153 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 DCXRQ7Z4W1 244 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 DEFB108BQ8NET1 73 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 OR4Q3Q8NH05 313 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 NANPQ8TBE9 248 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 SLCO4A1Q96BD0 722 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 ASB9Q96DX5 294 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 ZNF799Q96GE5 643 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 CLPTM1LQ96KA5 538 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 RBM4Q9BWF3 364 aaKnown RBP7.58□□□□□ -1.2
USF1-204ENST00000472217 DGCR6LQ9BY27 220 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 NMNAT2Q9BZQ4 307 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 REEP1Q9H902 201 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 MMP26Q9NRE1 261 aa7.58□□□□□ -1.2
USF1-204ENST00000472217 DDX28Q9NUL7 540 aaKnown RBP7.58□□□□□ -1.2
USF1-204ENST00000472217 PRPF19Q9UMS4 504 aaKnown RBP7.58□□□□□ -1.2
USF1-204ENST00000472217 POLR3KQ9Y2Y1 108 aaPredicted RBP7.58□□□□□ -1.2
USF1-204ENST00000472217 C5orf63A6NC05 138 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 CEACAM18A8MTB9 384 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 TRAPPC2LH3BP13 241 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 SPARCP09486 303 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 RAP2AP10114 183 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 CLUP10909 449 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 OTX1P32242 354 aaPredicted RBP7.57□□□□□ -1.2
USF1-204ENST00000472217 HILS1P60008 231 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 ZNF92Q03936 586 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 MAB21L1Q13394 359 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 ZNF181Q2M3W8 571 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 SNAI3Q3KNW1 292 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 ESCO2Q56NI9 601 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 FAM201AQ5SY85 155 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 USP43Q70EL4 1123 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 PGAP1Q75T13 922 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 MRPL21Q7Z2W9 205 aaKnown RBP7.57□□□□□ -1.2
USF1-204ENST00000472217 MOGAT3Q86VF5 341 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 MUC20Q8N307 709 aaPredicted RBP7.57□□□□□ -1.2
USF1-204ENST00000472217 ZNF511Q8NB15 262 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 OR2T33Q8NG76 320 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 OR10G2Q8NGC3 310 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 OR2AE1Q8NHA4 323 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 ZFAND2BQ8WV99 257 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 SPTSSAQ969W0 71 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 SLC6A7Q99884 636 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 NIPSNAP1Q9BPW8 284 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 TMEM165Q9HC07 324 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 TMEM100Q9NV29 134 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 TAS2R1Q9NYW7 299 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 BAIAP2Q9UQB8 552 aa7.57□□□□□ -1.2
USF1-204ENST00000472217 LRRC30A6NM36 301 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 RIIAD1A6NNX1 92 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 ACOT8O14734 319 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 FAM20BO75063 409 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 CST1P01037 141 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 WNT2P09544 360 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 ZNF12P17014 697 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 CA6P23280 308 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 FMO3P31513 532 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 PMELP40967 661 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 CD200P41217 278 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 GATA4P43694 442 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 ENTPD1P49961 510 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 SLC25A1P53007 311 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 ZNF154Q13106 437 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 MPPED2Q15777 294 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 PCK2Q16822 640 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms