RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SEH1LQ96EE3 360 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 PITX2Q99697 317 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 HCAR1Q9BXC0 346 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 MED20Q9H944 212 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 SPAG4Q9NPE6 437 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 TAS2R1Q9NYW7 299 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 DUX4Q9UBX2 424 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 AP3M1Q9Y2T2 418 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 POLR3KQ9Y2Y1 108 aaPredicted RBP6.74□□□□□ -1.33
USP48-207ENST00000471752 N6AMT1Q9Y5N5 214 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 AUP1Q9Y679 476 aa6.74□□□□□ -1.33
USP48-207ENST00000471752 A0A1B0GWJ7 208 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 TCRBV5S2A0A599 114 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 GMNCA6NCL1 334 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 DNAJC9-AS1A6NH13 148 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 H3BSA7 217 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 BHLHE40O14503 412 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 ARPC3O15145 178 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 FAM20BO75063 409 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 GADD45GO95257 159 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 LCATP04180 440 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 NR2C1P13056 603 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 HSD17B1P14061 328 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 FPR3P25089 353 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 LIPAP38571 399 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 MDH2P40926 338 aaKnown RBP6.73□□□□□ -1.33
USP48-207ENST00000471752 RPS6KA3P51812 740 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 PRKXP51817 358 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 DLX1P56177 255 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 TRAP1Q12931 704 aaKnown RBP6.73□□□□□ -1.33
USP48-207ENST00000471752 SLC9A3R2Q15599 337 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 TMEM155Q4W5P6 130 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 RUSC1-AS1Q66K80 236 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 SLC27A4Q6P1M0 643 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 ARL9Q6T311 187 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 BRD3OSQ6XYD6 125 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 ZNF620Q6ZNG0 422 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 PIGWQ7Z7B1 504 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 TMEM179BQ7Z7N9 219 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 ADCK1Q86TW2 530 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 C11orf53Q8IXP5 236 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 DEFB107AQ8IZN7 70 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 LINC00471Q8N535 108 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 C3orf56Q8N813 242 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 BOLLQ8N9W6 283 aaKnown RBP6.73□□□□□ -1.33
USP48-207ENST00000471752 GJC3Q8NFK1 279 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 OR13G1Q8NGZ3 307 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 ZFAND2BQ8WV99 257 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 APOBEC3DQ96AK3 386 aaPredicted RBP6.73□□□□□ -1.33
USP48-207ENST00000471752 CMTM5Q96DZ9 223 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 ZNF582Q96NG8 517 aaPredicted RBP6.73□□□□□ -1.33
USP48-207ENST00000471752 DIRC2Q96SL1 478 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 AMELYQ99218 206 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 COQ7Q99807 217 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 SUCNR1Q9BXA5 334 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 TNFRSF19Q9NS68 423 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 TMEM100Q9NV29 134 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 ZNF319Q9P2F9 582 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 CTSZQ9UBR2 303 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 NUP50Q9UKX7 468 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 TMCC3Q9ULS5 477 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 POLR1DQ9Y2S0 133 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 LYVE1Q9Y5Y7 322 aa6.73□□□□□ -1.33
USP48-207ENST00000471752 TANC2Q9HCD6 1990 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 PPIAL4EA0A075B759 164 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 IGHV3OR15-7A0A075B7D8 119 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 PPIAL4CA0A0B4J2A2 164 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 KIR2DS1A0A191URI9 304 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 A8MXK9 166 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 IQCF6A8MYZ5 107 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 PPIAL4DF5H284 164 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 TRIM77I1YAP6 450 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 FOXH1O75593 365 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 HLA-DQA2P01906 255 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 FABP3P05413 133 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 SFTPBP07988 381 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 PPIAL4FP0DN26 164 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 T-ENOLP0DO92 83 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 TNFRSF1AP19438 455 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 TNFSF4P23510 183 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 PRDX6P30041 224 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 SLC6A6P31641 620 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 HMGA2P52926 109 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 RAD23AP54725 363 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 KRTAP10-3P60369 221 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 SLC3A1Q07837 685 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 TSPAN31Q12999 210 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 BAMBIQ13145 260 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 KRT72Q14CN4 511 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 DEFB112Q30KQ8 113 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 ZNF404Q494X3 552 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 HSP90B2PQ58FF3 399 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 GLYATL3Q5SZD4 288 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 DOK3Q7L591 496 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 WDR86Q86TI4 376 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 ZDHHC21Q8IVQ6 265 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 PDZD9Q8IXQ8 264 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 LNX2Q8N448 690 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 KLHL36Q8N4N3 616 aa6.72□□□□□ -1.33
USP48-207ENST00000471752 SPICQ8N5J4 248 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms