RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 EMC9Q9Y3B6 208 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 LIPGQ9Y5X9 500 aa8.03□□□□□ -1.12
PTPRE-207ENST00000471218 NF1P21359 2839 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 TMEM269A0A1B0GVZ9 245 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 LOC390937A0A1W2PQ73 354 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 OR6C6A6NF89 314 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 NOTOA8MTQ0 251 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 KRT33AO76009 404 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 CDRT1O95170 752 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 CD99P14209 185 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 CCL1P22362 96 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 NR4A1P22736 598 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 APEX1P27695 318 aaKnown RBP8.02□□□□□ -1.13
PTPRE-207ENST00000471218 CALRP27797 417 aaKnown RBP8.02□□□□□ -1.13
PTPRE-207ENST00000471218 HSD11B1P28845 292 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 MPGP29372 298 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 AGTR1P30556 359 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 SDC2P34741 201 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 ART1P52961 327 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 NANOS3P60323 173 aaKnown RBP8.02□□□□□ -1.13
PTPRE-207ENST00000471218 PPP3R1P63098 170 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 PMP22Q01453 160 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 TGFBR3Q03167 851 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 SRYQ05066 204 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 ENDOGQ14249 297 aaKnown RBP8.02□□□□□ -1.13
PTPRE-207ENST00000471218 KRTAP27-1Q3LI81 207 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 SLC36A2Q495M3 483 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 ACSF3Q4G176 576 aaPredicted RBP8.02□□□□□ -1.13
PTPRE-207ENST00000471218 SPANXN2Q5MJ10 180 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 ELFN2Q5R3F8 820 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 BCL2L15Q5TBC7 163 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 METAP1DQ6UB28 335 aaPredicted RBP8.02□□□□□ -1.13
PTPRE-207ENST00000471218 DRAM2Q6UX65 266 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 FAM214BQ7L5A3 538 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 CDH26Q8IXH8 852 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 ELMOD2Q8IZ81 293 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 ZFP41Q8N8Y5 198 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 C1orf162Q8NEQ5 155 aaPredicted RBP8.02□□□□□ -1.13
PTPRE-207ENST00000471218 OR6K3Q8NGY3 331 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 LRRC46Q96FV0 321 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 DCLRE1CQ96SD1 692 aaKnown RBP8.02□□□□□ -1.13
PTPRE-207ENST00000471218 AMELYQ99218 206 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 KCNJ15Q99712 375 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 RBM24Q9BX46 236 aaKnown RBP8.02□□□□□ -1.13
PTPRE-207ENST00000471218 PNRC2Q9NPJ4 139 aaKnown RBP8.02□□□□□ -1.13
PTPRE-207ENST00000471218 AKIP1Q9NQ31 210 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 FAM206AQ9NX38 181 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 ABRACLQ9P1F3 81 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 OR52A1Q9UKL2 312 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 FOXJ3Q9UPW0 622 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 TIMM10BQ9Y5J6 103 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 PMF1-BGLAPU3KQ54 211 aa8.02□□□□□ -1.13
PTPRE-207ENST00000471218 ABCA4P78363 2273 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 ALPK2Q86TB3 2170 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 MBD3L4A6NDZ8 208 aaPredicted RBP8.01□□□□□ -1.13
PTPRE-207ENST00000471218 MBD3L3A6NE82 208 aaPredicted RBP8.01□□□□□ -1.13
PTPRE-207ENST00000471218 MBD3L5A6NJ08 208 aaPredicted RBP8.01□□□□□ -1.13
PTPRE-207ENST00000471218 C19orf84I3L1E1 186 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 ALX3O95076 343 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 MPZL1O95297 269 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 OCM2P0CE71 109 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 CD37P11049 281 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 PSKH1P11801 424 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 FOSL1P15407 271 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 RAB3BP20337 219 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 TIMP3P35625 211 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 ARR3P36575 388 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 KIR3DL2P43630 455 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 TAF13Q15543 124 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 SGCAQ16586 387 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 CEACAM16Q2WEN9 425 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 WDR38Q5JTN6 314 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 FBXW9Q5XUX1 488 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 OR7E24Q6IFN5 339 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 ANKRD16Q6P6B7 361 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 CFAP77Q6ZQR2 320 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 SSX8Q7RTT4 187 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.01□□□□□ -1.13
PTPRE-207ENST00000471218 P4HA3Q7Z4N8 544 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 TUSC5Q8IXB3 177 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 DMRTC2Q8IXT2 367 aaPredicted RBP8.01□□□□□ -1.13
PTPRE-207ENST00000471218 ZNF100Q8IYN0 542 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 PRSS35Q8N3Z0 413 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 SLC22A24Q8N4F4 322 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 NKAIN3Q8N8D7 197 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 MBD3L2Q8NHZ7 208 aaPredicted RBP8.01□□□□□ -1.13
PTPRE-207ENST00000471218 SMAP2Q8WU79 429 aaPredicted RBP8.01□□□□□ -1.13
PTPRE-207ENST00000471218 NANOS1Q8WY41 292 aaKnown RBP8.01□□□□□ -1.13
PTPRE-207ENST00000471218 FOXC2Q99958 501 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 PDCD1LG2Q9BQ51 273 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 USB1Q9BQ65 265 aaKnown RBP8.01□□□□□ -1.13
PTPRE-207ENST00000471218 OPA3Q9H6K4 179 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 SMURF1Q9HCE7 757 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 OBP2BQ9NPH6 170 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 G6PC2Q9NQR9 355 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 GRIP1Q9Y3R0 1128 aa8.01□□□□□ -1.13
PTPRE-207ENST00000471218 INTS1Q8N201 2190 aaKnown RBP8□□□□□ -1.13
PTPRE-207ENST00000471218 AIPO00170 330 aa8□□□□□ -1.13
PTPRE-207ENST00000471218 SGCEO43556 437 aa8□□□□□ -1.13
PTPRE-207ENST00000471218 RPP14O95059 124 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms