RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ADRA2AP08913 450 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF823P16415 610 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 MYL12AP19105 171 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 DCKP27707 260 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 MRPS34P82930 218 aaKnown RBP7.77□□□□□ -1.17
SF3A1-206ENST00000471037 ST3GAL4Q11206 333 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 SCGB2A2Q13296 93 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 SNTB2Q13425 540 aaKnown RBP7.77□□□□□ -1.17
SF3A1-206ENST00000471037 KCNMB1Q16558 191 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 NRN1LQ496H8 165 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 TEX30Q5JUR7 227 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF773Q6PK81 442 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 SHFQ7M4L6 423 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 SLC16A9Q7RTY1 509 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 PRSS48Q7RTY5 328 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 MDP1Q86V88 176 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 GLCCI1Q86VQ1 547 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 TIGD4Q8IY51 512 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 SVOPQ8N4V2 548 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 ACBD7Q8N6N7 88 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 TSPAN14Q8NG11 270 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 OR52I1Q8NGK6 324 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 ZNRF4Q8WWF5 429 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 MRPL24Q96A35 216 aaKnown RBP7.77□□□□□ -1.17
SF3A1-206ENST00000471037 TMEM80Q96HE8 168 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 SIGLEC11Q96RL6 698 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 INTS14Q96SY0 518 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 MYCBPQ99417 103 aaPredicted RBP7.77□□□□□ -1.17
SF3A1-206ENST00000471037 YIPF3Q9GZM5 350 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 GPR35Q9HC97 309 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 INPP5EQ9NRR6 644 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 PAK1IP1Q9NWT1 392 aaPredicted RBP7.77□□□□□ -1.17
SF3A1-206ENST00000471037 B3GNT2Q9NY97 397 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 DIMT1Q9UNQ2 313 aaKnown RBP7.77□□□□□ -1.17
SF3A1-206ENST00000471037 CMAHPQ9Y471 501 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 SPEF1Q9Y4P9 236 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 UGT2A1Q9Y4X1 527 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 SNX5Q9Y5X3 404 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 TMEM14AQ9Y6G1 99 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 COMMD3-BMI1R4GMX3 469 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 TVP23AA6NH52 213 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 LYNX1G3V0Z9 82 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 J3QRE1 110 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 M0R233 179 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 PHYHO14832 338 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 SELENOFO60613 162 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 IGHA1P01876 353 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 TFP02787 698 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 MRPL3P09001 348 aaKnown RBP7.76□□□□□ -1.17
SF3A1-206ENST00000471037 OR2T7P0C7T2 308 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 LYNX1P0DP58 116 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 MSR1P21757 451 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 ACHEP22303 614 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 NR4A1P22736 598 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 NAA10P41227 235 aaPredicted RBP7.76□□□□□ -1.17
SF3A1-206ENST00000471037 ENTPD1P49961 510 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 LSM6P62312 80 aaKnown RBP7.76□□□□□ -1.17
SF3A1-206ENST00000471037 DBPQ10586 325 aaPredicted RBP7.76□□□□□ -1.17
SF3A1-206ENST00000471037 PCK2Q16822 640 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 MSMPQ1L6U9 139 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 CEACAM16Q2WEN9 425 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 ELFN2Q5R3F8 820 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 RNLSQ5VYX0 342 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF627Q7L945 461 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 ERI1Q8IV48 349 aaKnown RBP7.76□□□□□ -1.17
SF3A1-206ENST00000471037 SLC35F2Q8IXU6 374 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF454Q8N9F8 522 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF511Q8NB15 262 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 OR6N2Q8NGY6 317 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 OR2T27Q8NH04 317 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 CLDND2Q8NHS1 167 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 C11orf40Q8WZ69 217 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 TMEM186Q96B77 213 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF837Q96EG3 531 aaPredicted RBP7.76□□□□□ -1.17
SF3A1-206ENST00000471037 MRPL48Q96GC5 212 aaKnown RBP7.76□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF75AQ96N20 296 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 FOXB1Q99853 325 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 CDCA4Q9BXL8 241 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 MRPL37Q9BZE1 423 aaKnown RBP7.76□□□□□ -1.17
SF3A1-206ENST00000471037 CCDC90BQ9GZT6 254 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 TPK1Q9H3S4 243 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 MS4A5Q9H3V2 200 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 METTL17Q9H7H0 456 aaPredicted RBP7.76□□□□□ -1.17
SF3A1-206ENST00000471037 WDR76Q9H967 626 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 POLE4Q9NR33 117 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 TMEM38BQ9NVV0 291 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 MRPL22Q9NWU5 206 aaKnown RBP7.76□□□□□ -1.17
SF3A1-206ENST00000471037 CHCHD3Q9NX63 227 aaKnown RBP7.76□□□□□ -1.17
SF3A1-206ENST00000471037 ERVK-18Q9QC07 812 aa7.76□□□□□ -1.17
SF3A1-206ENST00000471037 EXOSC1Q9Y3B2 195 aaKnown RBP7.76□□□□□ -1.17
SF3A1-206ENST00000471037 TRIM64CA6NLI5 447 aa7.75□□□□□ -1.17
SF3A1-206ENST00000471037 C12orf71A8MTZ7 269 aa7.75□□□□□ -1.17
SF3A1-206ENST00000471037 FAM157AC9JC47 383 aa7.75□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF593O00488 134 aaPredicted RBP7.75□□□□□ -1.17
SF3A1-206ENST00000471037 APOL3O95236 402 aa7.75□□□□□ -1.17
SF3A1-206ENST00000471037 MPZL1O95297 269 aa7.75□□□□□ -1.17
SF3A1-206ENST00000471037 FARS2O95363 451 aaKnown RBP7.75□□□□□ -1.17
SF3A1-206ENST00000471037 GPANK1O95872 356 aa7.75□□□□□ -1.17
SF3A1-206ENST00000471037 MT-ND2P03891 347 aa7.75□□□□□ -1.17
SF3A1-206ENST00000471037 MSMBP08118 114 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms