RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 TRMT10AQ8TBZ6 339 aaKnown RBP2.13□□□□□ -2.07
UBXN4-206ENST00000470687 PNPT1Q8TCS8 783 aaKnown RBP2.13□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF675Q8TD23 568 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 DCAKDQ8WVC6 231 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 LIPHQ8WWY8 451 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.13□□□□□ -2.07
UBXN4-206ENST00000470687 TSLPQ969D9 159 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 ADIPOR1Q96A54 375 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF486Q96H40 463 aaPredicted RBP2.13□□□□□ -2.07
UBXN4-206ENST00000470687 AKR1E2Q96JD6 320 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 TSNARE1Q96NA8 513 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 RBBP8Q99708 897 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 CABLES2Q9BTV7 478 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 MS4A8Q9BY19 250 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 WDR13Q9H1Z4 485 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 ELOVL6Q9H5J4 265 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 KAT8Q9H7Z6 458 aaKnown RBP2.13□□□□□ -2.07
UBXN4-206ENST00000470687 CXorf21Q9HAI6 301 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 SLC25A19Q9HC21 320 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 TIGARQ9NQ88 270 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 DEPPQ9NTK1 212 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 C1orf123Q9NWV4 160 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 GIN1Q9NXP7 522 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 VPS29Q9UBQ0 182 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 DCDC2Q9UHG0 476 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.13□□□□□ -2.07
UBXN4-206ENST00000470687 MGAT4AQ9UM21 535 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 ABCG2Q9UNQ0 655 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 FOXJ3Q9UPW0 622 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 FAM215AQ9Y5M1 114 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 AUP1Q9Y679 476 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 AP4B1Q9Y6B7 739 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 COL12A1Q99715 3063 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 SMG1Q96Q15 3661 aaKnown RBP2.13□□□□□ -2.07
UBXN4-206ENST00000470687 F8P00451 2351 aa2.13□□□□□ -2.07
UBXN4-206ENST00000470687 ABCA2Q9BZC7 2435 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ARHGAP21Q5T5U3 1957 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 A0A0A6YYD5 115 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 A0A0U1RQV5 110 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 MEIOCA2RUB1 952 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 NKX2-6A6NCS4 301 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 FRG2CA6NGY1 282 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ZNF860A6NHJ4 632 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 FAM159BA6NKW6 160 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 A8MUA0 341 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 SRRM5B3KS81 715 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 H0Y8G0 127 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 C19orf84I3L1E1 186 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 K7EQM0 130 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 KIF2AO00139 706 aaPredicted RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 FBP2O00757 339 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 TAPBPO15533 448 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ICOSLGO75144 302 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 SMIM24O75264 130 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ETHE1O95571 254 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 AIFM1O95831 613 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 C2P06681 752 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 GUSBP08236 651 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 HSMCR30P0CW71 290 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 CCL3P10147 92 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 GFAPP14136 432 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 CPMP14384 443 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 TAC1P20366 129 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 IMPDH1P20839 514 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 NT5EP21589 574 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 TBXA2RP21731 343 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 CD79BP40259 229 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ID1P41134 155 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 CCNG1P51959 295 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 EFNA3P52797 238 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 PKNOX1P55347 436 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ATP5IP56385 69 aaPredicted RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 TMEM50BP56557 158 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 RPL27P61353 136 aaKnown RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 CBX1P83916 185 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 HMGCS1Q01581 520 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 CKAP4Q07065 602 aaKnown RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 RIGQ13278 110 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 EXOSC2Q13868 293 aaKnown RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 EIF2B1Q14232 305 aaKnown RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 PDK3Q15120 406 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 EBPQ15125 230 aaKnown RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 FAM189A2Q15884 450 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 ZSWIM7Q19AV6 140 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 MS4A18Q3C1V0 323 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 SPIN4Q56A73 249 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 FAM182AQ5T1J6 154 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 AP1ARQ63HQ0 302 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 TMEM225Q6GV28 225 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 SLC48A1Q6P1K1 146 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 PAMR1Q6UXH9 720 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 C3P1Q6ZMU1 363 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 FRRS1Q6ZNA5 592 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 TIFABQ6ZNK6 161 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 RNF165Q6ZSG1 346 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 NANOGNBQ7Z5D8 188 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 MTERF4Q7Z6M4 381 aaKnown RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 CCDC71Q8IV32 467 aaPredicted RBP2.12□□□□□ -2.07
UBXN4-206ENST00000470687 CTAGE3PQ8IX95 158 aa2.12□□□□□ -2.07
UBXN4-206ENST00000470687 FAM9CQ8IZT9 166 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms