RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 CELF2-AS1Q8N7Q2 184 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 ZIC4Q8N9L1 334 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 SETD6Q8TBK2 473 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 TMEM163Q8TC26 289 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 SLC7A13Q8TCU3 470 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 ST7LQ8TDW4 575 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 RAB1CQ92928 201 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 RNFT2Q96EX2 444 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 ZNF385AQ96PM9 386 aaKnown RBP7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 OR7D2Q96RA2 312 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 ARHGDIGQ99819 225 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 WFDC6Q9BQY6 131 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 C1QTNF5Q9BXJ0 243 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 PRRG3Q9BZD7 231 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 LINC00470Q9BZP3 86 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 SEC61A2Q9H9S3 476 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 CACYBPQ9HB71 228 aaKnown RBP7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 TMEM165Q9HC07 324 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 ISYNA1Q9NPH2 558 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 NDUFB11Q9NX14 153 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 CALML5Q9NZT1 146 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 DIMT1Q9UNQ2 313 aaKnown RBP7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 EXOSC1Q9Y3B2 195 aaKnown RBP7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 TMED7Q9Y3B3 224 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 KCNE3Q9Y6H6 103 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 WNK1Q9H4A3 2382 aa7.6□□□□□ -1.19
SYNGAP1-205ENST00000470232 PPIAL4EA0A075B759 164 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 PPIAL4CA0A0B4J2A2 164 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 AQP7P3A6NL99 342 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 PPIAL4DF5H284 164 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 RPL36A-HNRNPH2H7BZ11 118 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 TPST2O60704 377 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 ZNF432O94892 652 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 AKR7A3O95154 331 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 AGR2O95994 175 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 FSHBP01225 129 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 IGHV2-5P01817 119 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 KRT8P05787 483 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 CELA3BP08861 270 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 CLEC2LP0C7M8 214 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 PPIAL4FP0DN26 164 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 RPS19P39019 145 aaKnown RBP7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 SELENOPP49908 381 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 ETV1P50549 477 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 TAS2R41P59536 307 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 ARF1P84077 181 aaKnown RBP7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 FUT5Q11128 374 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 LARS2Q15031 903 aaKnown RBP7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 KCNJ8Q15842 424 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 PCGF3Q3KNV8 242 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 ARHGAP11BQ3KRB8 267 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 SLC25A30Q5SVS4 291 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 RSBN1Q5VWQ0 802 aaPredicted RBP7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 LIPKQ5VXJ0 399 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 C1orf94Q6P1W5 598 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 NIPAL3Q6P499 406 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 ZNF730Q6ZMV8 503 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 C16orf62Q7Z3J2 963 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 ZER1Q7Z7L7 766 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 COMTD1Q86VU5 262 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 CMIPQ8IY22 773 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 TMEM99Q8N816 258 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 OR6T1Q8NGN1 323 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 OR4F5Q8NH21 305 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 UFD1Q92890 307 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 WDFY2Q96P53 400 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 SDHCQ99643 169 aaPredicted RBP7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 SYT3Q9BQG1 590 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 RSPO3Q9BXY4 272 aaPredicted RBP7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 MS4A7Q9GZW8 240 aaPredicted RBP7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 FGF20Q9NP95 211 aaPredicted RBP7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 EXOSC3Q9NQT5 275 aaKnown RBP7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 C14orf119Q9NWQ9 140 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 ERVK13-1Q9NX77 482 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 OPN4Q9UHM6 478 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 DUSP13Q9UII6 198 aa7.59□□□□□ -1.19
SYNGAP1-205ENST00000470232 IQCMA0A1B0GVH7 501 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 TMEM72A0PK05 275 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 SLC22A23A1A5C7 686 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 HTR3EA5X5Y0 456 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 CPSF4LA6NMK7 179 aaKnown RBP7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 AP3D1O14617 1153 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 PRODHO43272 600 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 TPD52L2O43399 206 aaKnown RBP7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 FCMRO60667 390 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 CDC14BO60729 498 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 FOXH1O75593 365 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 RP2O75695 350 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 IL1AP01583 271 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 CPEP16870 476 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 CXCR1P25024 350 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 AZGP1P25311 298 aaKnown RBP7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 GIPRP48546 466 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 WNT4P56705 351 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 RPS25P62851 125 aaKnown RBP7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 CDK5Q00535 292 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 MXD1Q05195 221 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 TSPAN31Q12999 210 aa7.58□□□□□ -1.2
SYNGAP1-205ENST00000470232 HNRNPA0Q13151 305 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms