RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 IGHMP01871 453 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 ZNF14P17017 642 aaPredicted RBP12.5□□□□□ -0.41
COL27A1-203ENST00000468565 MAKP20794 623 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 SLC9A3P48764 834 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 SNRPD2P62316 118 aaKnown RBP12.5□□□□□ -0.41
COL27A1-203ENST00000468565 ADIPOQQ15848 244 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 SHFQ7M4L6 423 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 CPOQ8IVL8 374 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 SKA3Q8IX90 412 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 MCHR2Q969V1 340 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 FBXO17Q96EF6 278 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 KCTD7Q96MP8 289 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 JAM3Q9BX67 310 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 HINT3Q9NQE9 182 aaKnown RBP12.5□□□□□ -0.41
COL27A1-203ENST00000468565 FBXO9Q9UK97 447 aaPredicted RBP12.5□□□□□ -0.41
COL27A1-203ENST00000468565 GSTK1Q9Y2Q3 226 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 CSPG4Q6UVK1 2322 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 VSTM5A8MXK1 200 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 SSX4O60224 188 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 CDRT1O95170 752 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 FARS2O95363 451 aaKnown RBP12.5□□□□□ -0.41
COL27A1-203ENST00000468565 IGHA1P01876 353 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 SAGP10523 405 aaPredicted RBP12.5□□□□□ -0.41
COL27A1-203ENST00000468565 NR2C1P13056 603 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 NF1P21359 2839 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 GABRA5P31644 462 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 ZNF84P51523 738 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 DSCR9P59020 149 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 DEFA1P59665 94 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 DEFA3P59666 94 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 RAB1AP62820 205 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 C10orf128Q5T292 105 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 LCE2DQ5TA82 110 aaPredicted RBP12.5□□□□□ -0.41
COL27A1-203ENST00000468565 STEAP3Q658P3 488 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 LNX2Q8N448 690 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 POC5Q8NA72 575 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 OR52N1Q8NH53 320 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 CCDC32Q9BV29 185 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 REG4Q9BYZ8 158 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 IL20RAQ9UHF4 553 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 BAIAP2Q9UQB8 552 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 ZANQ9Y493 2812 aa12.5□□□□□ -0.41
COL27A1-203ENST00000468565 IQCMA0A1B0GVH7 501 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 BHLHE40O14503 412 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 CTDSP2O14595 271 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 RGS5O15539 181 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 SLC2A10O95528 541 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 PTTG1O95997 202 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 OR4A8P0C604 315 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 PAICSP22234 425 aaKnown RBP12.49□□□□□ -0.41
COL27A1-203ENST00000468565 EFNA4P52798 201 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 RPS25P62851 125 aaKnown RBP12.49□□□□□ -0.41
COL27A1-203ENST00000468565 ACSM1Q08AH1 577 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 NDUFA5Q16718 116 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 FAM205BPQ63HN1 556 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 C22orf42Q6IC83 251 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 VHLLQ6RSH7 139 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 SMARCD3Q6STE5 483 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 LHFPL3Q86UP9 236 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 LRRC75AQ8NAA5 344 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 BBS1Q8NFJ9 593 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 TMEM203Q969S6 136 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 OTULINQ96BN8 352 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 COQ7Q99807 217 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 ALG12Q9BV10 488 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 BARHL1Q9BZE3 327 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 PLK3Q9H4B4 646 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 POLE4Q9NR33 117 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 RNF223E7ERA6 249 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 ZNF35P13682 527 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 NPR2P20594 1047 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 TNFSF8P32971 234 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 RPL27P61353 136 aaKnown RBP12.49□□□□□ -0.41
COL27A1-203ENST00000468565 FHL1Q13642 323 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 PLBD1Q6P4A8 553 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 CLEC2AQ6UVW9 174 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 TMPRSS11AQ6ZMR5 421 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 MEPCEQ7L2J0 689 aaKnown RBP12.49□□□□□ -0.41
COL27A1-203ENST00000468565 OAFQ86UD1 273 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 SYT14Q8NB59 555 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 ZNF485Q8NCK3 441 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 OR13C2Q8NGS9 318 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 SLC25A46Q96AG3 418 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 WDFY2Q96P53 400 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 NEURL2Q9BR09 285 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 IFT27Q9BW83 186 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 ERVK13-1Q9NX77 482 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 SF3B6Q9Y3B4 125 aaKnown RBP12.49□□□□□ -0.41
COL27A1-203ENST00000468565 CMAHPQ9Y471 501 aa12.49□□□□□ -0.41
COL27A1-203ENST00000468565 ABCA1O95477 2261 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 TRAV27A0A087WT01 109 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 TRDV1A0A1B0GX56 115 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 RIIAD1A6NNX1 92 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 BOLA2-SMG1P6H3BVE0 249 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 CSF3P09919 207 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 HOXB4P17483 251 aaPredicted RBP12.48□□□□□ -0.41
COL27A1-203ENST00000468565 FGF9P31371 208 aaPredicted RBP12.48□□□□□ -0.41
COL27A1-203ENST00000468565 THBS4P35443 961 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 PPOXP50336 477 aa12.48□□□□□ -0.41
COL27A1-203ENST00000468565 CTXN1P60606 82 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms