RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 TMCC2O75069 709 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 SS18L1O75177 396 aaPredicted RBP3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 PROP1O75360 226 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 LYZL6O75951 148 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 C1QL1O75973 258 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF432O94892 652 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 RPP14O95059 124 aaKnown RBP3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 NUDT3O95989 172 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 IGLV2-14P01704 120 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 TFP02787 698 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 CDK1P06493 297 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 ITGA5P08648 1049 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 ADRA2AP08913 450 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 HOXD4P09016 255 aaPredicted RBP3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 SBK2P0C263 348 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 CCDC159P0C7I6 412 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 HSMCR30P0CW71 290 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 CD79AP11912 226 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 NR2C1P13056 603 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 B4GALT1P15291 398 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF19P17023 458 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 MYL12AP19105 171 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC2A5P22732 501 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 GNLYP22749 145 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 PSMB10P40306 273 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 OR3A2P47893 321 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 PTH2RP49190 550 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 ETV1P50549 477 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 TUBA1BP68363 451 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 TUBA4AP68366 448 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 HSF2Q03933 536 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 GLO1Q04760 184 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 RAB40BQ12829 278 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 BLMHQ13867 455 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 EIF2B1Q14232 305 aaKnown RBP3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 MED22Q15528 200 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 TAF13Q15543 124 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 TP53I3Q53FA7 332 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC25A30Q5SVS4 291 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 LINC01590Q5TEZ4 76 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 FBXW9Q5XUX1 488 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 SUMO4Q6EEV6 95 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 TMEM211Q6ICI0 200 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 KRTAP5-3Q6L8H2 238 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 KLHL24Q6TFL4 600 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF813Q6ZN06 617 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 TUBA1AQ71U36 451 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 SLC16A9Q7RTY1 509 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 DPY19L4Q7Z388 723 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 FJX1Q86VR8 437 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 PRIMA1Q86XR5 153 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 TMEM123Q8N131 208 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 POMGNT2Q8NAT1 580 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 NAXEQ8NCW5 288 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 OR6K3Q8NGY3 331 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 OR2AJ1Q8NGZ0 328 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 RND1Q92730 232 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 TMEM45BQ96B21 275 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 STARD4Q96DR4 205 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 DAZAP1Q96EP5 407 aaKnown RBP3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 INTS14Q96SY0 518 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 CNN2Q99439 309 aaKnown RBP3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 ARPC5LQ9BPX5 153 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 C1QTNF6Q9BXI9 259 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 KCNN2Q9H2S1 579 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 DUSP21Q9H596 190 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 ADGRL4Q9HBW9 690 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 CCNB1IP1Q9NPC3 277 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 OBP2BQ9NPH6 170 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 MRPL22Q9NWU5 206 aaKnown RBP3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 LPAR3Q9UBY5 353 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 KCNG2Q9UJ96 466 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 LAMP5Q9UJQ1 280 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 IKZF2Q9UKS7 526 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 COPS3Q9UNS2 423 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 RCE1Q9Y256 329 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 ERGIC3Q9Y282 383 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 EXOGQ9Y2C4 368 aaKnown RBP3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF835Q9Y2P0 537 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 EXOSC1Q9Y3B2 195 aaKnown RBP3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 LAMA5O15230 3695 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 DNAJC13O75165 2243 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 KIAA1549Q9HCM3 1950 aa3.56□□□□□ -1.84
TMEM39A-204ENST00000468545 CHD8Q9HCK8 2581 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 PNMA8CA0A1B0GUJ8 204 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 A0A1W2PQL4 384 aaPredicted RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 MBD3L5A6NJ08 208 aaPredicted RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 NPIPB13A6NJU9 1138 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 OR6C65A6NJZ3 312 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 HSPB2A8KAH6 182 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 ZNF99A8MXY4 864 aaPredicted RBP3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 CENPBD1B2RD01 187 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 NPIPB4C9JG80 1138 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 H3BSH0 61 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 RER1O15258 196 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 LRRTM2O43300 516 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 DOK2O60496 412 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 RAD51DO75771 328 aa3.55□□□□□ -1.84
TMEM39A-204ENST00000468545 TNFSF13O75888 250 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms