RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 KCNN2Q9H2S1 579 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 CRLF2Q9HC73 371 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 MOV10Q9HCE1 1003 aaKnown RBP4.79□□□□□ -1.64
VPS41-211ENST00000466017 OBP2BQ9NPH6 170 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 TRIM36Q9NQ86 728 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 DDX28Q9NUL7 540 aaKnown RBP4.79□□□□□ -1.64
VPS41-211ENST00000466017 C14orf119Q9NWQ9 140 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 UPB1Q9UBR1 384 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 ZNF629Q9UEG4 869 aaPredicted RBP4.79□□□□□ -1.64
VPS41-211ENST00000466017 RSL24D1Q9UHA3 163 aaKnown RBP4.79□□□□□ -1.64
VPS41-211ENST00000466017 MRM2Q9UI43 246 aaKnown RBP4.79□□□□□ -1.64
VPS41-211ENST00000466017 ENPP5Q9UJA9 477 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 LHFPL6Q9Y693 200 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 MED12LQ86YW9 2145 aa4.79□□□□□ -1.64
VPS41-211ENST00000466017 CFAP54Q96N23 3096 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 EIF4E1BA6NMX2 242 aaKnown RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 ZNF878C9JN71 531 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 ZNF587BE7ETH6 402 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 E9PLN8 166 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 J3QLW9 94 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 SRSF10O75494 262 aaKnown RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 TNFSF13O75888 250 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 MPZL1O95297 269 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 LALBAP00709 142 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 SERPINA3P01011 423 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 HLA-DQA2P01906 255 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 HLA-DPB1P04440 258 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 ISG15P05161 165 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 TPOP07202 933 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 MRPL3P09001 348 aaKnown RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 MMP7P09237 267 aaPredicted RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 ZNF19P17023 458 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 COX5AP20674 150 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 GABRA5P31644 462 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 OPRM1P35372 400 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 TGFBR2P37173 567 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 OPRL1P41146 370 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 NAA10P41227 235 aaPredicted RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 CRYBB2P43320 205 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 RIDAP52758 137 aaKnown RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 HCCSP53701 268 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 GRB2P62993 217 aaKnown RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 TUBA1BP68363 451 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 SRSF2Q01130 221 aaKnown RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 ROR2Q01974 943 aaKnown RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 TGFBR3Q03167 851 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 SCRN3Q0VDG4 424 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 MRPL49Q13405 166 aaKnown RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 ALKBH1Q13686 389 aaKnown RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 EIF2B1Q14232 305 aaKnown RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 P2RY6Q15077 328 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 CDK5R1Q15078 307 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 C3AR1Q16581 482 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 SGCAQ16586 387 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 CTF1Q16619 201 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 MEP1BQ16820 701 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 CEACAM16Q2WEN9 425 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 KRTAP27-1Q3LI81 207 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 TOR2AQ5JU69 321 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 LIPNQ5VXI9 398 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 CARD17Q5XLA6 110 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 OR7E24Q6IFN5 339 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 ANKRD16Q6P6B7 361 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 PCSK4Q6UW60 755 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 PAMR1Q6UXH9 720 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 Q6ZPA2 131 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 Q6ZT83 130 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 TUBA1AQ71U36 451 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 LINGO2Q7L985 606 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 DCXRQ7Z4W1 244 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 KRT77Q7Z794 578 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 P2RY8Q86VZ1 359 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 CLVS1Q8IUQ0 354 aaPredicted RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 C17orf78Q8N4C9 275 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 C9orf106Q8NAJ2 232 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 THEM6Q8WUY1 208 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 NSMAFQ92636 917 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 BCL2L2Q92843 193 aaPredicted RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 STARD4Q96DR4 205 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 SLAMF6Q96DU3 332 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 SMIM19Q96E16 107 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 C4orf36Q96KX1 117 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 PGLYRP3Q96LB9 341 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 DCLRE1CQ96SD1 692 aaKnown RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 VKORC1Q9BQB6 163 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 ZNF416Q9BWM5 594 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 SFXN3Q9BWM7 321 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 HDHD5Q9BXW7 423 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 PIGMQ9H3S5 423 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 RERGLQ9H628 205 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 SP140LQ9H930 580 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 ISG20L2Q9H9L3 353 aaKnown RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 ELOVL3Q9HB03 270 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 PNRC2Q9NPJ4 139 aaKnown RBP4.78□□□□□ -1.64
VPS41-211ENST00000466017 ASF1BQ9NVP2 202 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 NDUFB11Q9NX14 153 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 SLCO1C1Q9NYB5 712 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 TAS2R16Q9NYV7 291 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 FBXL3Q9UKT7 428 aa4.78□□□□□ -1.64
VPS41-211ENST00000466017 SSR3Q9UNL2 185 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms