RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 HLA-DQA2P01906 255 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 LCATP04180 440 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 IGHV4-38-2P0DP08 117 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 HSD17B1P14061 328 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 NOS3P29474 1203 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 GSSP48637 474 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 ECH1Q13011 328 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 SLC35F1Q5T1Q4 408 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 LRRN1Q6UXK5 716 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 GNPDA2Q8TDQ7 276 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 MCUR1Q96AQ8 359 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 ATF6BQ99941 703 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 ZNF747Q9BV97 191 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 MRPL22Q9NWU5 206 aaKnown RBP17.44■□□□□ 0.38
CSPG5-204ENST00000465441 CD300AQ9UGN4 299 aa17.44■□□□□ 0.38
CSPG5-204ENST00000465441 LRRC30A6NM36 301 aa17.43■□□□□ 0.38
CSPG5-204ENST00000465441 IDH3BO43837 385 aa17.43■□□□□ 0.38
CSPG5-204ENST00000465441 RRM2P31350 389 aa17.43■□□□□ 0.38
CSPG5-204ENST00000465441 IFNGR2P38484 337 aa17.43■□□□□ 0.38
CSPG5-204ENST00000465441 ZNF404Q494X3 552 aa17.43■□□□□ 0.38
CSPG5-204ENST00000465441 LYPD2Q6UXB3 125 aa17.43■□□□□ 0.38
CSPG5-204ENST00000465441 BTNL3Q6UXE8 466 aa17.43■□□□□ 0.38
CSPG5-204ENST00000465441 C1orf87Q8N0U7 546 aa17.43■□□□□ 0.38
CSPG5-204ENST00000465441 DACT3Q96B18 629 aaPredicted RBP17.43■□□□□ 0.38
CSPG5-204ENST00000465441 PLEKHA8Q96JA3 519 aa17.43■□□□□ 0.38
CSPG5-204ENST00000465441 NSMCE2Q96MF7 247 aa17.43■□□□□ 0.38
CSPG5-204ENST00000465441 MAGEL2Q9UJ55 1249 aa17.43■□□□□ 0.38
CSPG5-204ENST00000465441 TMCC3Q9ULS5 477 aa17.43■□□□□ 0.38
CSPG5-204ENST00000465441 IGHV2-70DA0A0C4DH43 119 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 KIR2DS1A0A191URI9 304 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 SNX3O60493 162 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 FABP3P05413 133 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 PPIAL4GP0DN37 164 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 GATA4P43694 442 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 TPTEP56180 551 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.42■□□□□ 0.38
CSPG5-204ENST00000465441 TRAP1Q12931 704 aaKnown RBP17.42■□□□□ 0.38
CSPG5-204ENST00000465441 TSPAN31Q12999 210 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 MALLQ13021 153 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 PGAP1Q75T13 922 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 PARP8Q8N3A8 854 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 CELF2-AS1Q8N7Q2 184 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 OR8B3Q8NGG8 313 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 UPRTQ96BW1 309 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 MAP6Q96JE9 813 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 OR8B2Q96RD0 313 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 CDRT15Q96T59 188 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 DDOQ99489 341 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 FAM107BQ9H098 131 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 IL1RAPQ9NPH3 570 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 DOCK11Q5JSL3 2073 aa17.42■□□□□ 0.38
CSPG5-204ENST00000465441 IRF2P14316 349 aa17.41■□□□□ 0.38
CSPG5-204ENST00000465441 ZNF823P16415 610 aa17.41■□□□□ 0.38
CSPG5-204ENST00000465441 CD200P41217 278 aa17.41■□□□□ 0.38
CSPG5-204ENST00000465441 PRAMEF6Q5VXH4 476 aa17.41■□□□□ 0.38
CSPG5-204ENST00000465441 PGBD2Q6P3X8 592 aa17.41■□□□□ 0.38
CSPG5-204ENST00000465441 ZNF620Q6ZNG0 422 aa17.41■□□□□ 0.38
CSPG5-204ENST00000465441 PGAM4Q8N0Y7 254 aa17.41■□□□□ 0.38
CSPG5-204ENST00000465441 C19orf18Q8NEA5 215 aa17.41■□□□□ 0.38
CSPG5-204ENST00000465441 ZNRF4Q8WWF5 429 aa17.41■□□□□ 0.38
CSPG5-204ENST00000465441 ERGIC1Q969X5 290 aa17.41■□□□□ 0.38
CSPG5-204ENST00000465441 EGLN3Q9H6Z9 239 aa17.41■□□□□ 0.38
CSPG5-204ENST00000465441 ZMAT3Q9HA38 289 aaKnown RBP17.41■□□□□ 0.38
CSPG5-204ENST00000465441 ARPC2O15144 300 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 FAM20BO75063 409 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 RNASE1P07998 156 aaKnown RBP17.4■□□□□ 0.38
CSPG5-204ENST00000465441 PYCR1P32322 319 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 RPS27P42677 84 aaKnown RBP17.4■□□□□ 0.38
CSPG5-204ENST00000465441 MTNR1AP48039 350 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 PITPNBP48739 271 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 RAD23AP54725 363 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 SLC9A3R2Q15599 337 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 MPPED2Q15777 294 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 SAMD4BQ5PRF9 694 aaKnown RBP17.4■□□□□ 0.38
CSPG5-204ENST00000465441 CLEC12AQ5QGZ9 265 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 ZNF841Q6ZN19 808 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 C9orf139Q6ZV77 190 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 NLRC3Q7RTR2 1065 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 OR10S1Q8NGN2 331 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 OR11L1Q8NGX0 322 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 Q8TCH9 128 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 SPRYD4Q8WW59 207 aaPredicted RBP17.4■□□□□ 0.38
CSPG5-204ENST00000465441 NUDT16L1Q9BRJ7 211 aaKnown RBP17.4■□□□□ 0.38
CSPG5-204ENST00000465441 NSRP1Q9H0G5 558 aaKnown RBP17.4■□□□□ 0.38
CSPG5-204ENST00000465441 UFSP2Q9NUQ7 469 aa17.4■□□□□ 0.38
CSPG5-204ENST00000465441 TVP23AA6NH52 213 aa17.39■□□□□ 0.37
CSPG5-204ENST00000465441 M0R135 149 aa17.39■□□□□ 0.37
CSPG5-204ENST00000465441 PLATP00750 562 aa17.39■□□□□ 0.37
CSPG5-204ENST00000465441 CA6P23280 308 aa17.39■□□□□ 0.37
CSPG5-204ENST00000465441 HMGA2P52926 109 aa17.39■□□□□ 0.37
CSPG5-204ENST00000465441 HOXA4Q00056 320 aaPredicted RBP17.39■□□□□ 0.37
CSPG5-204ENST00000465441 ZNF362Q5T0B9 420 aaPredicted RBP17.39■□□□□ 0.37
CSPG5-204ENST00000465441 WDR25Q64LD2 544 aaPredicted RBP17.39■□□□□ 0.37
CSPG5-204ENST00000465441 SHISA2Q6UWI4 295 aa17.39■□□□□ 0.37
CSPG5-204ENST00000465441 DCDC5Q6ZRR9 648 aa17.39■□□□□ 0.37
CSPG5-204ENST00000465441 MRPL21Q7Z2W9 205 aaKnown RBP17.39■□□□□ 0.37
CSPG5-204ENST00000465441 ZDHHC21Q8IVQ6 265 aa17.39■□□□□ 0.37
CSPG5-204ENST00000465441 CYB561A3Q8NBI2 242 aa17.39■□□□□ 0.37
CSPG5-204ENST00000465441 TAF15Q92804 592 aaKnown RBP eCLIP17.39■□□□□ 0.37
CSPG5-204ENST00000465441 SLC25A28Q96A46 364 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms