RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 DVL1P1P54792 670 aaPredicted RBP6.51□□□□□ -1.37
USP48-206ENST00000464577 F2RL1P55085 397 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 IL15RAQ13261 267 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 BIKQ13323 160 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 TOMM34Q15785 309 aaPredicted RBP6.51□□□□□ -1.37
USP48-206ENST00000464577 IGSF11Q5DX21 431 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 FAM76BQ5HYJ3 339 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 DEGS2Q6QHC5 323 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 SLC16A13Q7RTY0 426 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 RD3Q7Z3Z2 195 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 PEG10Q86TG7 708 aaKnown RBP6.51□□□□□ -1.37
USP48-206ENST00000464577 KDM8Q8N371 416 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 SLC22A24Q8N4F4 322 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 POC1AQ8NBT0 407 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 OR4K15Q8NH41 348 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 LYPD6BQ8NI32 183 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 NUBPLQ8TB37 319 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 ZNF524Q96C55 264 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 CMBLQ96DG6 245 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 C14orf79Q96F83 325 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 CPNE2Q96FN4 548 aaPredicted RBP6.51□□□□□ -1.37
USP48-206ENST00000464577 ZC3H10Q96K80 434 aaKnown RBP6.51□□□□□ -1.37
USP48-206ENST00000464577 C2orf50Q96LR7 162 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 NECAB3Q96P71 396 aaPredicted RBP6.51□□□□□ -1.37
USP48-206ENST00000464577 CNTD2Q9H8S5 307 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 OR5AC2Q9NZP5 309 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 DHCR7Q9UBM7 475 aaKnown RBP6.51□□□□□ -1.37
USP48-206ENST00000464577 TINAGQ9UJW2 476 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 LHX6Q9UPM6 363 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 EMC9Q9Y3B6 208 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 HEATR5AQ86XA9 2040 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 SCN2AQ99250 2005 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 A0A0A6YYC8 382 aaPredicted RBP6.51□□□□□ -1.37
USP48-206ENST00000464577 TMEM14DPA8MWL7 114 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 C11orf98E9PRG8 122 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 I3L1I5 382 aaPredicted RBP6.51□□□□□ -1.37
USP48-206ENST00000464577 YKT6O15498 198 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 LRP3O75074 770 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 DXOO77932 396 aaKnown RBP6.51□□□□□ -1.37
USP48-206ENST00000464577 PMP2P02689 132 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 GAPDHP04406 335 aaKnown RBP6.51□□□□□ -1.37
USP48-206ENST00000464577 S100A6P06703 90 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 CHRM2P08172 466 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 GSTP1P09211 210 aaKnown RBP6.51□□□□□ -1.37
USP48-206ENST00000464577 VSIG8P0DPA2 414 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 ZNF44P15621 663 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 CXCR1P25024 350 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 FOXK1P85037 733 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 HGFACQ04756 655 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 GLO1Q04760 184 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 ELAVL1Q15717 326 aaKnown RBP6.51□□□□□ -1.37
USP48-206ENST00000464577 PCK2Q16822 640 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 SLC22A6Q4U2R8 563 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 TMEM268Q5VZI3 342 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 DHRS11Q6UWP2 260 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 CLEC18BQ6UXF7 455 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 NAA40Q86UY6 237 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 OOSP2Q86WS3 158 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 ANGPTL5Q86XS5 388 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 COMMD1Q8N668 190 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 NKD1Q969G9 470 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 TSACCQ96A04 125 aaPredicted RBP6.51□□□□□ -1.37
USP48-206ENST00000464577 KIRREL1Q96J84 757 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 SULT4A1Q9BR01 284 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 SLC26A1Q9H2B4 701 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 C5orf66Q9H5L9 145 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 FBRSQ9HAH7 460 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 HRASLS2Q9NWW9 162 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 SLC5A6Q9Y289 635 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 MEMO1Q9Y316 297 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 FANCMQ8IYD8 2048 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 HCRTR1O43613 425 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 GATCO43716 136 aaKnown RBP6.5□□□□□ -1.37
USP48-206ENST00000464577 ZNF217O75362 1048 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 CST4P01036 141 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 IGHV2-5P01817 119 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 GNB3P16520 340 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 CPT2P23786 658 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 ADH6P28332 368 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 MMP16P51512 607 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 HSD17B7P56937 341 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 STARD6P59095 220 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 ZNF117Q03924 483 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 COL13A1Q5TAT6 717 aaPredicted RBP6.5□□□□□ -1.37
USP48-206ENST00000464577 OTPQ5XKR4 325 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 ZNF529Q6P280 563 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 DNM1P34Q6PK57 102 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 RBMS3Q6XE24 437 aaKnown RBP6.5□□□□□ -1.37
USP48-206ENST00000464577 Q7L0L9 218 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 SLC29A4Q7RTT9 530 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 FAM160A2Q8N612 972 aaPredicted RBP6.5□□□□□ -1.37
USP48-206ENST00000464577 ST7LQ8TDW4 575 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 ROBO4Q8WZ75 1007 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 MALSU1Q96EH3 234 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 FOXN4Q96NZ1 517 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 CLCC1Q96S66 551 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 TAF9BQ9HBM6 251 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 NIT2Q9NQR4 276 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 CACNA1IQ9P0X4 2223 aa6.5□□□□□ -1.37
USP48-206ENST00000464577 CPAMD8Q8IZJ3 1885 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms