RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SLC16A6O15403 523 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 APOC1P02654 83 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 KITLGP21583 273 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 CX3CR1P49238 355 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 ZNF81P51508 661 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 TMED1Q13445 227 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 TNK1Q13470 666 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 MEDAGQ5VYS4 303 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 KCTD18Q6PI47 426 aaPredicted RBP12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 CLEC2AQ6UVW9 174 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 ZNF555Q8NEP9 628 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 OR51G2Q8NGK0 314 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 MNTQ99583 582 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 RHNO1Q9BSD3 238 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 TMUB1Q9BVT8 246 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 CGGBP1Q9UFW8 167 aaPredicted RBP12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 N6AMT1Q9Y5N5 214 aa12.39□□□□□ -0.43
SQSTM1-205ENST00000464493 F8P00451 2351 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 MPZL2O60487 215 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 ENTPD6O75354 484 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 ANXA2P07355 339 aaKnown RBP12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 CSF3P09919 207 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 SBK2P0C263 348 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 SLC2A1P11166 492 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 CD99P14209 185 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 DAOP14920 347 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 ATP6V1E1P36543 226 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 POU4F2Q12837 409 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 GK2Q14410 553 aaPredicted RBP12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 OCLNQ16625 522 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 PCGF3Q3KNV8 242 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 SNAI3Q3KNW1 292 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 OGFRL1Q5TC84 451 aaPredicted RBP12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 OR2T2Q6IF00 324 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 LRRN1Q6UXK5 716 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 KRT77Q7Z794 578 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 SLC35F2Q8IXU6 374 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 UBASH3BQ8TF42 649 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 ASB17Q8WXJ9 295 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 FAM168AQ92567 244 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 GTF3AQ92664 365 aaKnown RBP12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 SP140LQ9H930 580 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 MYOZ1Q9NP98 299 aaPredicted RBP12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 CLN6Q9NWW5 311 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 NKIRAS2Q9NYR9 191 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 NKX1-2Q9UD57 310 aaPredicted RBP12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.38□□□□□ -0.434e-8■■□□□ 14.3
SQSTM1-205ENST00000464493 COPS3Q9UNS2 423 aa12.38□□□□□ -0.43
SQSTM1-205ENST00000464493 ACANP16112 2415 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 SNTNA6NMZ2 147 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 H0YHG0 523 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 PHYHO14832 338 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 SPRY3O43610 288 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 HPXP02790 462 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 SELEP16581 610 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 GABRB1P18505 474 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 MAGEB1P43366 347 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 PDLIM4P50479 330 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 ZNF121P58317 390 aaPredicted RBP12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 SLC34A1Q06495 639 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 CARTPTQ16568 116 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 TSTQ16762 297 aaKnown RBP12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 ZMAT1Q5H9K5 638 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 DEGS2Q6QHC5 323 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 USP51Q70EK9 711 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 PGAP1Q75T13 922 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 ENTHD1Q8IYW4 607 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 OR5AS1Q8N127 324 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 RHOXF1Q8NHV9 184 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 MROQ9BYG7 248 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 NIPAL2Q9H841 368 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 MSL2Q9HCI7 577 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 AASSQ9UDR5 926 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 ZDHHC8Q9ULC8 765 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 LRP12Q9Y561 859 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 MED13LQ71F56 2210 aa12.37□□□□□ -0.43
SQSTM1-205ENST00000464493 IGHV4-30-2A0A087WSY4 118 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 LOC390937A0A1W2PQ73 354 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 C5orf63A6NC05 138 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 ZSCAN5BA6NJL1 495 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 ZNF670-ZNF695F2Z2N8 137 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 H7C1Q1 480 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 PSMD9O00233 223 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 TBX1O43435 398 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 ZNF254O75437 659 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 IGHV1-46P01743 117 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 OR2T7P0C7T2 308 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 ANOS1P23352 680 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 MTNR1AP48039 350 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 CXCR4P61073 352 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 CCL8P80075 99 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 ROM1Q03395 351 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 ZNF92Q03936 586 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 CDK5R2Q13319 367 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 FAM209AQ5JX71 171 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 GLYATL3Q5SZD4 288 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 TTC23Q5W5X9 447 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 ZNF322Q6U7Q0 402 aaPredicted RBP12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 FAM57BQ71RH2 274 aa12.36□□□□□ -0.43
SQSTM1-205ENST00000464493 PRSS45Q7RTY3 260 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms