RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 DEXIO95424 95 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 AHSA1O95433 338 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 NSA2O95478 260 aaKnown RBP2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 AIFM1O95831 613 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 C6orf47O95873 294 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 CSTAP01040 98 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 IGLV2-23P01705 113 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 ANXA5P08758 320 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 OMGP23515 440 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 CYB561P49447 251 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 EIF2B2P49770 351 aaKnown RBP2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 SERPINB9P50453 376 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 NCBP2P52298 156 aaKnown RBP eCLIP2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 AP2S1P53680 142 aaPredicted RBP2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 SPCS3P61009 180 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 NUTF2P61970 127 aaKnown RBP2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 SKP1P63208 163 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 PAX5Q02548 391 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 TGM3Q08188 693 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 TWF1Q12792 350 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 TCP10Q12799 353 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 PMS2P3Q13401 168 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 SMCO1Q147U7 214 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 USF2Q15853 346 aaPredicted RBP2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 KLHL12Q53G59 568 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 PRAMEF20Q5VT98 475 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 Q6P435 159 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 CERS6Q6ZMG9 384 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 Q6ZSR3 168 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 ABHD13Q7L211 337 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 COPS6Q7L5N1 327 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 FAM122BQ7Z309 247 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 DCXRQ7Z4W1 244 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 SETD3Q86TU7 594 aaPredicted RBP2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 SNX31Q8N9S9 440 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 OR4C5Q8NGB2 326 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 PHOSPHO2Q8TCD6 241 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 SLC7A13Q8TCU3 470 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 TNFRSF14Q92956 283 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 FAM3DQ96BQ1 224 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 ZNF285Q96NJ3 590 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 IFI27L2Q9H2X8 130 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 FGF20Q9NP95 211 aaPredicted RBP2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 CMTM6Q9NX76 183 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 TAS2R1Q9NYW7 299 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 ZNF629Q9UEG4 869 aaPredicted RBP2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 CYB5R1Q9UHQ9 305 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 CD84Q9UIB8 345 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 PITPNC1Q9UKF7 332 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 RAB26Q9ULW5 256 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 SLC22A14Q9Y267 594 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 ARL2BPQ9Y2Y0 163 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 F11RQ9Y624 299 aaKnown RBP2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 CTTNBP2Q8WZ74 1663 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 ASTN1O14525 1302 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 CEMIPQ8WUJ3 1361 aa2.36□□□□□ -2.03
HMGXB4-205ENST00000464480 COL16A1Q07092 1604 aaPredicted RBP2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 ERCC6Q03468 1493 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 CAMSAP2Q08AD1 1489 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 CEP164Q9UPV0 1460 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 LTBP1Q14766 1721 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 A0A075B6Q4 140 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 A0A096LNJ9 63 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 IGKV6D-21A0A0A0MT36 114 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 TRBV11-1A0A0K0K1C0 115 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 GLYATL1P3A0A0U1RQE8 302 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 RAB19A4D1S5 217 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 ZNF98A6NK75 572 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 HIDE1A8MVS5 230 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 ANKRD65E5RJM6 399 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 ATP6V1G2-DDX39BF2Z307 99 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 DNALI1O14645 258 aaPredicted RBP2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 CD5LO43866 347 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 CCNKO75909 580 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 OR2J3O76001 311 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 CLIC3O95833 236 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 MBP02144 154 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 TNNC2P02585 160 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 FTH1P02794 183 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 MLNP12872 115 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 TCP1P17987 556 aaKnown RBP2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 SERPINB1P30740 379 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 OTX1P32242 354 aaPredicted RBP2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 GTF2H1P32780 548 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 HRH1P35367 487 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 CD79BP40259 229 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 RFX3P48380 749 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 CDK9P50750 372 aaKnown RBP2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 RAB10P61026 200 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 C2orf54Q08AI8 447 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 C9orf135Q5VTT2 229 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 LRRC66Q68CR7 880 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 DUPD1Q68J44 220 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 SPOPLQ6IQ16 392 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 NIPAL1Q6NVV3 410 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 ZNF493Q6ZR52 646 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 LINC00173Q6ZV60 143 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 TAC4Q86UU9 113 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 PLCZ1Q86YW0 608 aa2.35□□□□□ -2.03
HMGXB4-205ENST00000464480 PCP2Q8IVA1 136 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms