RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 IL5RAQ01344 420 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 POU4F2Q12837 409 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 TMEM255AQ5JRV8 349 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 C6orf52Q5T4I8 152 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 MBNL2Q5VZF2 373 aaKnown RBP14.56□□□□□ -0.08
VPS52-215ENST00000464425 RHOUQ7L0Q8 258 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 ZNF454Q8N9F8 522 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 OTOSQ8NHW6 89 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 FBLIM1Q8WUP2 373 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 SNX33Q8WV41 574 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 APH1BQ8WW43 257 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 MAP6Q96JE9 813 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 MNTQ99583 582 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 YIPF3Q9GZM5 350 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 F5H5K5 113 aa14.55□□□□□ -0.08
VPS52-215ENST00000464425 SELENOFO60613 162 aa14.55□□□□□ -0.08
VPS52-215ENST00000464425 WBP4O75554 376 aaKnown RBP14.55□□□□□ -0.08
VPS52-215ENST00000464425 MTNR1AP48039 350 aa14.55□□□□□ -0.08
VPS52-215ENST00000464425 ECH1Q13011 328 aa14.55□□□□□ -0.08
VPS52-215ENST00000464425 MOGQ16653 247 aa14.55□□□□□ -0.08
VPS52-215ENST00000464425 RSPO1Q2MKA7 263 aaPredicted RBP14.55□□□□□ -0.08
VPS52-215ENST00000464425 DPY19L4Q7Z388 723 aa14.55□□□□□ -0.08
VPS52-215ENST00000464425 DCXRQ7Z4W1 244 aa14.55□□□□□ -0.08
VPS52-215ENST00000464425 C1orf174Q8IYL3 243 aa14.55□□□□□ -0.08
VPS52-215ENST00000464425 OR6N2Q8NGY6 317 aa14.55□□□□□ -0.08
VPS52-215ENST00000464425 ST7LQ8TDW4 575 aa14.55□□□□□ -0.08
VPS52-215ENST00000464425 UBASH3BQ8TF42 649 aa14.55□□□□□ -0.08
VPS52-215ENST00000464425 CNN2Q99439 309 aaKnown RBP14.55□□□□□ -0.08
VPS52-215ENST00000464425 ADGRL4Q9HBW9 690 aa14.55□□□□□ -0.08
VPS52-215ENST00000464425 PNRC2Q9NPJ4 139 aaKnown RBP14.55□□□□□ -0.08
VPS52-215ENST00000464425 RAB26Q9ULW5 256 aa14.55□□□□□ -0.08
VPS52-215ENST00000464425 TMEM14AQ9Y6G1 99 aa14.55□□□□□ -0.08
VPS52-215ENST00000464425 LOC390937A0A1W2PQ73 354 aa14.54□□□□□ -0.08
VPS52-215ENST00000464425 C17orf100A8MU93 164 aa14.54□□□□□ -0.08
VPS52-215ENST00000464425 HPXP02790 462 aa14.54□□□□□ -0.08
VPS52-215ENST00000464425 SBK2P0C263 348 aa14.54□□□□□ -0.08
VPS52-215ENST00000464425 SLC25A16P16260 332 aa14.54□□□□□ -0.08
VPS52-215ENST00000464425 MAGEB1P43366 347 aa14.54□□□□□ -0.08
VPS52-215ENST00000464425 PSG7Q13046 419 aa14.54□□□□□ -0.08
VPS52-215ENST00000464425 THAP5Q7Z6K1 395 aa14.54□□□□□ -0.08
VPS52-215ENST00000464425 OR10S1Q8NGN2 331 aa14.54□□□□□ -0.08
VPS52-215ENST00000464425 CMBLQ96DG6 245 aa14.54□□□□□ -0.08
VPS52-215ENST00000464425 DCLRE1CQ96SD1 692 aaKnown RBP14.54□□□□□ -0.08
VPS52-215ENST00000464425 ZNF184Q99676 751 aaPredicted RBP14.54□□□□□ -0.08
VPS52-215ENST00000464425 ATF6BQ99941 703 aa14.54□□□□□ -0.08
VPS52-215ENST00000464425 PIMREGQ9BSJ6 248 aa14.54□□□□□ -0.08
VPS52-215ENST00000464425 ANKRD60Q9BZ19 345 aa14.54□□□□□ -0.08
VPS52-215ENST00000464425 MYOZ1Q9NP98 299 aaPredicted RBP14.54□□□□□ -0.08
VPS52-215ENST00000464425 DDX28Q9NUL7 540 aaKnown RBP14.54□□□□□ -0.08
VPS52-215ENST00000464425 MRPS18AQ9NVS2 196 aaKnown RBP14.54□□□□□ -0.08
VPS52-215ENST00000464425 AASSQ9UDR5 926 aa14.54□□□□□ -0.08
VPS52-215ENST00000464425 RPL36Q9Y3U8 105 aaKnown RBP14.54□□□□□ -0.08
VPS52-215ENST00000464425 SPRY3O43610 288 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 NCR1O76036 304 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 MT-ND5P03915 603 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 ALOX5APP20292 161 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 COL8A2P25067 703 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 NAA10P41227 235 aaPredicted RBP14.53□□□□□ -0.08
VPS52-215ENST00000464425 ZNF81P51508 661 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 CCL8P80075 99 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 CDK5R2Q13319 367 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 EIF2B1Q14232 305 aaKnown RBP14.53□□□□□ -0.08
VPS52-215ENST00000464425 HLXQ14774 488 aaPredicted RBP14.53□□□□□ -0.08
VPS52-215ENST00000464425 TSTQ16762 297 aaKnown RBP14.53□□□□□ -0.08
VPS52-215ENST00000464425 KRTAP27-1Q3LI81 207 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 SPATC1Q76KD6 591 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 NAA40Q86UY6 237 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 ZNF786Q8N393 782 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 OR51G2Q8NGK0 314 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 APOBEC3DQ96AK3 386 aaPredicted RBP14.53□□□□□ -0.08
VPS52-215ENST00000464425 ABHD6Q9BV23 337 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 CENPMQ9NSP4 180 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 PTTG3PQ9NZH4 202 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 PCDHGB1Q9Y5G3 927 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 TLN2Q9Y4G6 2542 aa14.53□□□□□ -0.08
VPS52-215ENST00000464425 ZANQ9Y493 2812 aa14.52□□□□□ -0.08
VPS52-215ENST00000464425 A0A096LNT2 108 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 PLSCR5A0PG75 271 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 H3BSA7 217 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 NDUFS8O00217 210 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 TIMM8AO60220 97 aaPredicted RBP14.52□□□□□ -0.09
VPS52-215ENST00000464425 LYNP07948 512 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 ACSM4P0C7M7 580 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 OR2T7P0C7T2 308 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 TUBG1P23258 451 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 MYF6P23409 242 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 ATP6V1E1P36543 226 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 NR4A2P43354 598 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 RGS6P49758 472 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 MMP15P51511 669 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 TAF13Q15543 124 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 SLC35F2Q8IXU6 374 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 OR5L1Q8NGL2 311 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 OR2T27Q8NH04 317 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 CNIH3Q8TBE1 160 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 RNF133Q8WVZ7 376 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 ASB17Q8WXJ9 295 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 SLAMF6Q96DU3 332 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 RNFT2Q96EX2 444 aa14.52□□□□□ -0.09
VPS52-215ENST00000464425 BPESC1Q9GZL8 116 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms