RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TBR1Q16650 682 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 PDSS1Q5T2R2 415 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 Q6ZS92 163 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 NOXO1Q8NFA2 376 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 OR51D1Q8NGF3 324 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 RNF133Q8WVZ7 376 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 EXTL1Q92935 676 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 CPNE4Q96A23 557 aaPredicted RBP12.82□□□□□ -0.36
COL5A1-205ENST00000464187 ZNF845Q96IR2 970 aaPredicted RBP12.82□□□□□ -0.36
COL5A1-205ENST00000464187 KCNK15Q9H427 330 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 EXO5Q9H790 373 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 TAS2R4Q9NYW5 299 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 KLK11Q9UBX7 282 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 OR52A1Q9UKL2 312 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 ITGB1BP2Q9UKP3 347 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 NCOR2Q9Y618 2525 aa12.82□□□□□ -0.36
COL5A1-205ENST00000464187 ANKRD11Q6UB99 2663 aaPredicted RBP12.81□□□□□ -0.36
COL5A1-205ENST00000464187 LOC107986453A0A1B0GWG9 222 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 GMDSO60547 372 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 ACTL6AO96019 429 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 PGA4P0DJD7 388 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 PGA3P0DJD8 388 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 ACHEP22303 614 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 MAB21L1Q13394 359 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 POU4F3Q15319 338 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 RAB11BQ15907 218 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 FAM166AQ6J272 317 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 DEGS2Q6QHC5 323 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 ABHD17AQ96GS6 310 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 NKX3-1Q99801 234 aaPredicted RBP12.81□□□□□ -0.36
COL5A1-205ENST00000464187 MED28Q9H204 178 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 NIPAL2Q9H841 368 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 IGF2RP11717 2491 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 ATMQ13315 3056 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 ANKRD20A5PA0PJZ0 165 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 C1QTNF9BB2RNN3 333 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 NPIPA2E9PIF3 369 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 NPIPA3F8WFD2 350 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 SMLR1H3BR10 107 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 XRCC3O43542 346 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 ISG15P05161 165 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 H2BFMP0C1H6 154 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 C1QTNF9P0C862 333 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 STOMP27105 288 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 POU3F4P49335 361 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 GZMKP49863 264 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 RAG2P55895 527 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 CLRN1P58418 232 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 AP3S2P59780 193 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 CAMK2DQ13557 499 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 GSG1Q2KHT4 349 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 Q5BKY6 102 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 OLFML2AQ68BL7 652 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 TMEM53Q6P2H8 277 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 LRFN4Q6PJG9 635 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 DNM1P46Q6ZS02 220 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 CREB3L2Q70SY1 520 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 BIVMQ86UB2 503 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 MEIOBQ8N635 442 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 RBMXL3Q8N7X1 1067 aaKnown RBP12.81□□□□□ -0.36
COL5A1-205ENST00000464187 PLPP7Q8NBV4 271 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 OR10H5Q8NGA6 315 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 OR9K2Q8NGE7 335 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 OR13C3Q8NGS6 347 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 GIMAP1Q8WWP7 306 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 ROBO4Q8WZ75 1007 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 SLC25A44Q96H78 314 aaPredicted RBP12.81□□□□□ -0.36
COL5A1-205ENST00000464187 RBP7Q96R05 134 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 OR2M2Q96R28 347 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 C20orf85Q9H1P6 137 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 OR51J1Q9H342 316 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 ZNF275Q9NSD4 429 aaPredicted RBP12.81□□□□□ -0.36
COL5A1-205ENST00000464187 HHLA2Q9UM44 414 aa12.81□□□□□ -0.36
COL5A1-205ENST00000464187 TNRC6AQ8NDV7 1962 aaKnown RBP12.8□□□□□ -0.36
COL5A1-205ENST00000464187 A0A1W2PPL8 197 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 NAP1L6A6NFF2 107 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 CTAG2O75638 210 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 TPPPO94811 219 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 CD2P06729 351 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 LAP3P28838 519 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 ERP29P30040 261 aaKnown RBP12.8□□□□□ -0.36
COL5A1-205ENST00000464187 CLDN17P56750 224 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 FAPQ12884 760 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 THEM4Q5T1C6 240 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 ANKRD16Q6P6B7 361 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 HDDC2Q7Z4H3 204 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 OR11H7Q8NGC8 314 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 OR10S1Q8NGN2 331 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 OR6X1Q8NH79 312 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 C15orf40Q8WUR7 153 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 SLC25A28Q96A46 364 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 FAM3DQ96BQ1 224 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 SLAMF6Q96DU3 332 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 ZNF385AQ96PM9 386 aaKnown RBP12.8□□□□□ -0.36
COL5A1-205ENST00000464187 TAAR6Q96RI8 345 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 TMEM246Q9BRR3 403 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 TRAF4Q9BUZ4 470 aaPredicted RBP12.8□□□□□ -0.36
COL5A1-205ENST00000464187 SF3B5Q9BWJ5 86 aaKnown RBP12.8□□□□□ -0.36
COL5A1-205ENST00000464187 CENPMQ9NSP4 180 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 SPRR3Q9UBC9 169 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms