RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 FKRPQ9H9S5 495 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 HHATLQ9HCP6 504 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 SERINC1Q9NRX5 453 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 KRT84Q9NSB2 600 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 FAM118AQ9NWS6 357 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 SMPD3Q9NY59 655 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-204ENST00000463622 CLCF1Q9UBD9 225 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 TMCC3Q9ULS5 477 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 MGAT4BQ9UQ53 548 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 AP4B1Q9Y6B7 739 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 CDH10Q9Y6N8 788 aa3.12□□□□□ -1.91
SCFD1-204ENST00000463622 TEX13CA0A0J9YWL9 993 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 PRR32B1ATL7 298 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 SULT2B1O00204 365 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 DNPH1O43598 174 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 WBP4O75554 376 aaKnown RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 PMS2P2O95744 297 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 IGHV3-9P01782 118 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 GYPBP06028 91 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 ADORA3P0DMS8 318 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 ANXA8P13928 327 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 UQCRBP14927 111 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 HIST1H1CP16403 213 aaKnown RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 GRK5P34947 590 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 UGT2B10P36537 528 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 EIF1P41567 113 aaKnown RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 HTR3AP46098 478 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 NUDT6P53370 316 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 EFNB1P98172 346 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 CDK5Q00535 292 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 MYBPC1Q00872 1141 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 POU3F1Q03052 451 aaPredicted RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 CD47Q08722 323 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 NPRL3Q12980 569 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 CRMP1Q14194 572 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 SLC17A1Q14916 467 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 GUSBP1Q15486 140 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 SGCBQ16585 318 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 PGGHGQ32M88 737 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 RFX4Q33E94 735 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 ZBED5Q49AG3 693 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 ARMC4Q5T2S8 1044 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 SLX4IPQ5VYV7 408 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 CARD17Q5XLA6 110 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 ADAM5Q6NVV9 412 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 SMARCD3Q6STE5 483 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 SLC16A12Q6ZSM3 486 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 NANOGNBQ7Z5D8 188 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 LUZP2Q86TE4 346 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 OAFQ86UD1 273 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 ENTHD1Q8IYW4 607 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 RNF113BQ8IZP6 322 aaKnown RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 PARP8Q8N3A8 854 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 RFLNBQ8N5W9 214 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 OR2C3Q8N628 320 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 OR51L1Q8NGJ5 315 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 OR9Q1Q8NGQ5 310 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 OR4K13Q8NH42 304 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 CNIH3Q8TBE1 160 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 RNF128Q8TEB7 428 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 DDIT4LQ96D03 193 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 STARD4Q96DR4 205 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 MUS81Q96NY9 551 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 IL4I1Q96RQ9 567 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 RBM4BQ9BQ04 359 aaKnown RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 KATNB1Q9BVA0 655 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 RBM4Q9BWF3 364 aaKnown RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 TAPBPLQ9BX59 468 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 BEX2Q9BXY8 128 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 SLC19A3Q9BZV2 496 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 EVA1AQ9H8M9 152 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 SLC25A19Q9HC21 320 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 HINT3Q9NQE9 182 aaKnown RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 NANSQ9NR45 359 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 MRPL39Q9NYK5 338 aaKnown RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 IL20Q9NYY1 176 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 KIF17Q9P2E2 1029 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF229Q9UJW7 825 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 POFUT2Q9Y2G5 429 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 HDGFL3Q9Y3E1 203 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 IER3IP1Q9Y5U9 82 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 FLVCR1Q9Y5Y0 555 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 TGP01266 2768 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 LOC100130705A0A1B0GUX0 176 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 A0A1W2PNV4 684 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 OR6C68A6NDL8 312 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 CCDC182A6NF36 153 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 IFITM10A6NMD0 228 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 C16orf97H3BN30 126 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 H3BN98 237 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 HS3ST1O14792 307 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 SURF4O15260 269 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 XPNPEP2O43895 674 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 GPRIN2O60269 458 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 UPK3AO75631 287 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 TRMUO75648 421 aaKnown RBP3.11□□□□□ -1.91
SCFD1-204ENST00000463622 SEC14L2O76054 403 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 ZNF432O94892 652 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 NDUFB2O95178 105 aa3.11□□□□□ -1.91
SCFD1-204ENST00000463622 ACTL6AO96019 429 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms