RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 ARHGAP23Q9P227 1491 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 FHOD3Q2V2M9 1422 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 PDS5BQ9NTI5 1447 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 A0A1B0GW15 77 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 RAB19A4D1S5 217 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 TVP23AA6NH52 213 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 FAM166BA8MTA8 275 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 PANO1I0J062 215 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 SLC16A7O60669 478 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 RDH16O75452 317 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 TRAPPC6AO75865 159 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 RAB3DO95716 219 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 CD37P11049 281 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 F2RP25116 425 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 ANP32AP39687 249 aaKnown RBP2.78□□□□□ -1.96
USH2A-203ENST00000463147 MYCNOSP40205 109 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 LHX2P50458 406 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 ZNF136P52737 540 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 TIMM10P62072 90 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 RPS23P62266 143 aaKnown RBP2.78□□□□□ -1.96
USH2A-203ENST00000463147 CAPRIN1Q14444 709 aaKnown RBP2.78□□□□□ -1.96
USH2A-203ENST00000463147 PON2Q15165 354 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 ATP6V1FQ16864 119 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 TMEM183BQ1AE95 376 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 COA6Q5JTJ3 125 aaKnown RBP2.78□□□□□ -1.96
USH2A-203ENST00000463147 Q6ZVH6 145 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 SNX20Q7Z614 316 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 LRRC8AQ8IWT6 810 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 TMEM183AQ8IXX5 376 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 CBR4Q8N4T8 237 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 GPR26Q8NDV2 337 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 OR6Q1Q8NGQ2 317 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 LINC01006Q8NI28 216 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 CREB3L1Q96BA8 519 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 MAGEB18Q96M61 343 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 KCNS3Q9BQ31 491 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 UTP23Q9BRU9 249 aaKnown RBP2.78□□□□□ -1.96
USH2A-203ENST00000463147 ARMC7Q9H6L4 198 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 REEP1Q9H902 201 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 DMAP1Q9NPF5 467 aaPredicted RBP2.78□□□□□ -1.96
USH2A-203ENST00000463147 ZNF226Q9NYT6 803 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 ZNF282Q9UDV7 671 aaPredicted RBP2.78□□□□□ -1.96
USH2A-203ENST00000463147 GMEB1Q9Y692 573 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 V9GYY9 64 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 ADAMTSL3P82987 1691 aa2.78□□□□□ -1.96
USH2A-203ENST00000463147 LRP4O75096 1905 aa2.78□□□□□ -1.97
USH2A-203ENST00000463147 TSPOAP1O95153 1857 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 A0A0A6YYD5 115 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 B4GALT5O43286 388 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 FABP3P05413 133 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 OR8U9P0C7N5 309 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 THRAP10827 490 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 ZNF19P17023 458 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 IGFBP3P17936 291 aaPredicted RBP2.77□□□□□ -1.97
USH2A-203ENST00000463147 RAB3BP20337 219 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 RAB5AP20339 215 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 IL32P24001 234 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 CCNE1P24864 410 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 CXCL5P42830 114 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 NMUP48645 174 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 NDUFA8P51970 172 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 PPP1CBP62140 327 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 IFFO1Q0D2I5 559 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 STX3Q13277 289 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 VAMP3Q15836 100 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 PSG3Q16557 428 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 CEMP1Q6PRD7 247 aaPredicted RBP2.77□□□□□ -1.97
USH2A-203ENST00000463147 EPGNQ6UW88 154 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 TMPRSS11AQ6ZMR5 421 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 ABHD12BQ7Z5M8 362 aaPredicted RBP2.77□□□□□ -1.97
USH2A-203ENST00000463147 CDKL3Q8IVW4 592 aaPredicted RBP2.77□□□□□ -1.97
USH2A-203ENST00000463147 SELENOHQ8IZQ5 122 aaKnown RBP2.77□□□□□ -1.97
USH2A-203ENST00000463147 SYCE1Q8N0S2 351 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 CCDC54Q8NEL0 328 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 OR8U1Q8NH10 309 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 RGP1Q92546 391 aaPredicted RBP2.77□□□□□ -1.97
USH2A-203ENST00000463147 MRGPRFQ96AM1 343 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 SLC35E1Q96K37 410 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 GLT1D1Q96MS3 346 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 ACBD6Q9BR61 282 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 OSBPL11Q9BXB4 747 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 SLIRPQ9GZT3 109 aaKnown RBP2.77□□□□□ -1.97
USH2A-203ENST00000463147 SYT4Q9H2B2 425 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 CDC42EP4Q9H3Q1 356 aaKnown RBP2.77□□□□□ -1.97
USH2A-203ENST00000463147 ZNF442Q9H7R0 627 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 EDA2RQ9HAV5 297 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 MRM2Q9UI43 246 aaKnown RBP2.77□□□□□ -1.97
USH2A-203ENST00000463147 ZNF225Q9UK10 706 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 NXT1Q9UKK6 140 aaKnown RBP2.77□□□□□ -1.97
USH2A-203ENST00000463147 ZNF257Q9Y2Q1 563 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 OR51B2Q9Y5P1 312 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 KIF25-AS1Q9Y6Z4 181 aa2.77□□□□□ -1.97
USH2A-203ENST00000463147 COL16A1Q07092 1604 aaPredicted RBP2.77□□□□□ -1.97
USH2A-203ENST00000463147 ATRXP46100 2492 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 GOLGA8QA0A0J9YX86 632 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 A0A0J9YXV3 536 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 SNAI2O43623 268 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 ZNF861PO60384 105 aa2.76□□□□□ -1.97
USH2A-203ENST00000463147 SS18L1O75177 396 aaPredicted RBP2.76□□□□□ -1.97
USH2A-203ENST00000463147 ZMPSTE24O75844 475 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms