RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 GCM1Q9NP62 436 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 EMC7Q9NPA0 242 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 PAPOLBQ9NRJ5 636 aaKnown RBP13.1□□□□□ -0.31
SND1-203ENST00000463020 STARD10Q9Y365 291 aa13.1□□□□□ -0.31
SND1-203ENST00000463020 H0YL77 283 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 H7C1C5 153 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 KNG1P01042 644 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 CST2P09228 141 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 LIPAP38571 399 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 MDH2P40926 338 aaKnown RBP13.09□□□□□ -0.31
SND1-203ENST00000463020 ALDH3B2P48448 385 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 RPS6KA3P51812 740 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 RAG2P55895 527 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 LCN6P62502 163 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 IL18R1Q13478 541 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 ZIK1Q3SY52 487 aaPredicted RBP13.09□□□□□ -0.31
SND1-203ENST00000463020 ESCO2Q56NI9 601 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 RBM48Q5RL73 367 aaKnown RBP13.09□□□□□ -0.31
SND1-203ENST00000463020 OR2T5Q6IEZ7 315 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 FIP1L1Q6UN15 594 aaKnown RBP13.09□□□□□ -0.31
SND1-203ENST00000463020 THAP5Q7Z6K1 395 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 ALDH16A1Q8IZ83 802 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 OR5AS1Q8N127 324 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 OR10AD1Q8NGE0 317 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 OR10S1Q8NGN2 331 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 OR2T29Q8NH02 315 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 CMBLQ96DG6 245 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 SGTBQ96EQ0 304 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 NRBF2Q96F24 287 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 CDADC1Q9BWV3 514 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 SSBP3Q9BWW4 388 aaPredicted RBP13.09□□□□□ -0.31
SND1-203ENST00000463020 CHIAQ9BZP6 476 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 GABARAPL1Q9H0R8 117 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 KCNN2Q9H2S1 579 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 TOR3AQ9H497 397 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 TMEM165Q9HC07 324 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 IL1RAPQ9NPH3 570 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 PTTG2Q9NZH5 202 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 CGGBP1Q9UFW8 167 aaPredicted RBP13.09□□□□□ -0.31
SND1-203ENST00000463020 PPP1R3CQ9UQK1 317 aa13.09□□□□□ -0.31
SND1-203ENST00000463020 DNAH3Q8TD57 4116 aa13.08□□□□□ -0.31
SND1-203ENST00000463020 A0A1W2PPL8 197 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 TRIM64CA6NLI5 447 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 H3BSA7 217 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 GNAO1P09471 354 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 KITLGP21583 273 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 PMELP40967 661 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 MTNR1AP48039 350 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 DYNC1I2Q13409 638 aaKnown RBP13.08□□□□□ -0.32
SND1-203ENST00000463020 FHL1Q13642 323 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 HLXQ14774 488 aaPredicted RBP13.08□□□□□ -0.32
SND1-203ENST00000463020 ASPHD2Q6ICH7 369 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 GPR141Q7Z602 305 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 KLBQ86Z14 1044 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 LRRC75AQ8NAA5 344 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 LZICQ8WZA0 190 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 TXNIPQ9H3M7 391 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 PRDM13Q9H4Q3 707 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 BLOC1S6Q9UL45 172 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 TIMM10BQ9Y5J6 103 aa13.08□□□□□ -0.32
SND1-203ENST00000463020 SRRM5B3KS81 715 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 TSPAN15O95858 294 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 ABHD16AO95870 558 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 RPS2P15880 293 aaKnown RBP13.07□□□□□ -0.32
SND1-203ENST00000463020 PRSS12P56730 875 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 PIN1Q13526 163 aaPredicted RBP13.07□□□□□ -0.32
SND1-203ENST00000463020 ZMAT1Q5H9K5 638 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 OLFML2AQ68BL7 652 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 BRICD5Q6PL45 260 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 LYPD2Q6UXB3 125 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 OFCC1Q8IZS5 231 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 SETD9Q8NE22 299 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 C19orf18Q8NEA5 215 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 TMEM239Q8WW34 195 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 LIPHQ8WWY8 451 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 RAB40AQ8WXH6 277 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 HSH2DQ96JZ2 352 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 TMEM246Q9BRR3 403 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 REEP1Q9H902 201 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 FAM118AQ9NWS6 357 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 IL19Q9UHD0 177 aa13.07□□□□□ -0.32
SND1-203ENST00000463020 RYR3Q15413 4870 aa13.06□□□□□ -0.32
SND1-203ENST00000463020 C22orf46C9J442 243 aa13.06□□□□□ -0.32
SND1-203ENST00000463020 SFTPBP07988 381 aa13.06□□□□□ -0.32
SND1-203ENST00000463020 PPIAL4GP0DN37 164 aa13.06□□□□□ -0.32
SND1-203ENST00000463020 FGF12P61328 243 aa13.06□□□□□ -0.32
SND1-203ENST00000463020 ZBED5Q49AG3 693 aa13.06□□□□□ -0.32
SND1-203ENST00000463020 HIST2H2BDQ6DRA6 164 aa13.06□□□□□ -0.32
SND1-203ENST00000463020 C1orf94Q6P1W5 598 aa13.06□□□□□ -0.32
SND1-203ENST00000463020 LRRN1Q6UXK5 716 aa13.06□□□□□ -0.32
SND1-203ENST00000463020 C17orf107Q6ZR85 190 aa13.06□□□□□ -0.32
SND1-203ENST00000463020 TPD52L3Q96J77 140 aa13.06□□□□□ -0.32
SND1-203ENST00000463020 ELOVL3Q9HB03 270 aa13.06□□□□□ -0.32
SND1-203ENST00000463020 POLE4Q9NR33 117 aa13.06□□□□□ -0.32
SND1-203ENST00000463020 RSL24D1Q9UHA3 163 aaKnown RBP13.06□□□□□ -0.32
SND1-203ENST00000463020 HIF3AQ9Y2N7 669 aa13.06□□□□□ -0.32
SND1-203ENST00000463020 SH3GLB1Q9Y371 365 aa13.06□□□□□ -0.32
SND1-203ENST00000463020 KIR2DS1A0A191URI9 304 aa13.05□□□□□ -0.32
SND1-203ENST00000463020 NPIPB13A6NJU9 1138 aa13.05□□□□□ -0.32
SND1-203ENST00000463020 NPIPB4C9JG80 1138 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms