RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 OR8G5Q8NG78 346 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 OR10S1Q8NGN2 331 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 OR6K6Q8NGW6 343 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 GIPC3Q8TF64 312 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 CANT1Q8WVQ1 401 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 ZNRF4Q8WWF5 429 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 SPTSSAQ969W0 71 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 SIGLEC11Q96RL6 698 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 COPS4Q9BT78 406 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 HCAR1Q9BXC0 346 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 G6PC2Q9NQR9 355 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 DDX28Q9NUL7 540 aaKnown RBP8.59□□□□□ -1.03
SF3A3-204ENST00000462258 PPP1R3CQ9UQK1 317 aa8.59□□□□□ -1.03
SF3A3-204ENST00000462258 A0A0G2JMP0 313 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 A0A0X1KG70 313 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 GNGT2O14610 69 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 MLNRO43193 412 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 PLPP2O43688 288 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 E2F6O75461 281 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 CLUP10909 449 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 HOXB6P17509 224 aaKnown RBP8.58□□□□□ -1.04
SF3A3-204ENST00000462258 FMO3P31513 532 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 GRK5P34947 590 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 RBMXP38159 391 aaKnown RBP8.58□□□□□ -1.04
SF3A3-204ENST00000462258 SRP9P49458 86 aaKnown RBP8.58□□□□□ -1.04
SF3A3-204ENST00000462258 BTG1P62324 171 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 SLC27A4Q6P1M0 643 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 FAHD2BQ6P2I3 314 aaPredicted RBP8.58□□□□□ -1.04
SF3A3-204ENST00000462258 CD300LDQ6UXZ3 194 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 PGAP1Q75T13 922 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 MRPL21Q7Z2W9 205 aaKnown RBP8.58□□□□□ -1.04
SF3A3-204ENST00000462258 DCXRQ7Z4W1 244 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 RFLNBQ8N5W9 214 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 OR4M2Q8NGB6 313 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 OR13G1Q8NGZ3 307 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 ST7LQ8TDW4 575 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 FAHD2AQ96GK7 314 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 MEGF10Q96KG7 1140 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 FEVQ99581 238 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 SLC30A2Q9BRI3 323 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 NMNAT2Q9BZQ4 307 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 METTL17Q9H7H0 456 aaPredicted RBP8.58□□□□□ -1.04
SF3A3-204ENST00000462258 GCM1Q9NP62 436 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 CMC2Q9NRP2 79 aa8.58□□□□□ -1.04
SF3A3-204ENST00000462258 PDP1Q9P0J1 537 aaPredicted RBP8.58□□□□□ -1.04
SF3A3-204ENST00000462258 WNK2Q9Y3S1 2297 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 ZNF878C9JN71 531 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 F5H5P2 479 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 H0YL77 283 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 J3QLI3 93 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 TCF21O43680 179 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 FKBP6O75344 327 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 DNAJC8O75937 253 aaPredicted RBP8.57□□□□□ -1.04
SF3A3-204ENST00000462258 SBK2P0C263 348 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 OTX1P32242 354 aaPredicted RBP8.57□□□□□ -1.04
SF3A3-204ENST00000462258 BLVRAP53004 296 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 LCN2P80188 198 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 SCGB2A2Q13296 93 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 ZMYND11Q15326 602 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 PCK2Q16822 640 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 SNAI3Q3KNW1 292 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 TMEM155Q4W5P6 130 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 DCAF12L2Q5VW00 463 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 DRAM2Q6UX65 266 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 TMEM179BQ7Z7N9 219 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 NAA40Q86UY6 237 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 MUC20Q8N307 709 aaPredicted RBP8.57□□□□□ -1.04
SF3A3-204ENST00000462258 KLHL36Q8N4N3 616 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 TEX29Q8N6K0 151 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 ZNF511Q8NB15 262 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 OR2AE1Q8NHA4 323 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 ZNF420Q8TAQ5 688 aaPredicted RBP8.57□□□□□ -1.04
SF3A3-204ENST00000462258 SLCO4A1Q96BD0 722 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 SLC7A6OSQ96CW6 309 aaPredicted RBP8.57□□□□□ -1.04
SF3A3-204ENST00000462258 SLAMF6Q96DU3 332 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 YY1AP1Q9H869 796 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 PCDHB10Q9UN67 800 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 POMPQ9Y244 141 aa8.57□□□□□ -1.04
SF3A3-204ENST00000462258 LOC105371242A0A075B767 164 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 IGHV3-64DA0A0J9YX35 117 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 A0A1B0GWJ7 208 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 TCRBV3S1A0A5B6 114 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 FAM183AA6NL82 134 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 TMEM178BH3BS89 294 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 IFNL4K9M1U5 179 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 ZNF593O00488 134 aaPredicted RBP8.56□□□□□ -1.04
SF3A3-204ENST00000462258 FOXH1O75593 365 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 CYB5R3P00387 301 aaPredicted RBP8.56□□□□□ -1.04
SF3A3-204ENST00000462258 HLA-DPB1P04440 258 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 PAICSP22234 425 aaKnown RBP8.56□□□□□ -1.04
SF3A3-204ENST00000462258 ANOS1P23352 680 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 GATA3P23771 443 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 POU1F1P28069 291 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 MDH2P40926 338 aaKnown RBP8.56□□□□□ -1.04
SF3A3-204ENST00000462258 PRKXP51817 358 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 RAD23AP54725 363 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 CBX1P83916 185 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 TAF13Q15543 124 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 TEX30Q5JUR7 227 aa8.56□□□□□ -1.04
SF3A3-204ENST00000462258 GLYATL3Q5SZD4 288 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms