RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 A0A0A6YYH2 397 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 A6NJ64 397 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 GALR2O43603 387 aaPredicted RBP17.82■□□□□ 0.44
CCM2-203ENST00000461377 CSF1P09603 554 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 ZNF20P17024 532 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 POU3F2P20265 443 aaPredicted RBP17.82■□□□□ 0.44
CCM2-203ENST00000461377 RAB3AP20336 220 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 RAB6AP20340 208 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 PRSS3P35030 304 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 GZMKP49863 264 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 ZNF84P51523 738 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 PCGF3Q3KNV8 242 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 FAM57BQ71RH2 274 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 SLC22A24Q8N4F4 322 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 OR13C9Q8NGT0 318 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 OR10D3Q8NH80 312 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 FAM173AQ9BQD7 235 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 UQCC2Q9BRT2 126 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 SOX7Q9BT81 388 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 METTL17Q9H7H0 456 aaPredicted RBP17.82■□□□□ 0.44
CCM2-203ENST00000461377 EMC3Q9P0I2 261 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 KIAA1549Q9HCM3 1950 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 RGS13O14921 159 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 ERP29P30040 261 aaKnown RBP17.82■□□□□ 0.44
CCM2-203ENST00000461377 CASRP41180 1078 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 CLDN15P56746 228 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 SSBP1Q04837 148 aaKnown RBP17.82■□□□□ 0.44
CCM2-203ENST00000461377 SPEM2Q0P670 501 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 CDK10Q15131 360 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 ST3GAL2Q16842 350 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 FAAP20Q6NZ36 180 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 GPX8Q8TED1 209 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 SIGLEC12Q96PQ1 595 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 NKIRAS2Q9NYR9 191 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 FLVCR2Q9UPI3 526 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 NCKAP5O14513 1909 aa17.82■□□□□ 0.44
CCM2-203ENST00000461377 KMT2EQ8IZD2 1858 aa17.81■□□□□ 0.44
CCM2-203ENST00000461377 SULT1C2O00338 296 aa17.81■□□□□ 0.44
CCM2-203ENST00000461377 MRPS34P82930 218 aaKnown RBP17.81■□□□□ 0.44
CCM2-203ENST00000461377 GALK2Q01415 458 aa17.81■□□□□ 0.44
CCM2-203ENST00000461377 SF3B4Q15427 424 aaKnown RBP eCLIP17.81■□□□□ 0.44
CCM2-203ENST00000461377 LINC00303Q3SY05 128 aa17.81■□□□□ 0.44
CCM2-203ENST00000461377 CCDC92Q53HC0 331 aaPredicted RBP17.81■□□□□ 0.44
CCM2-203ENST00000461377 DOK3Q7L591 496 aa17.81■□□□□ 0.44
CCM2-203ENST00000461377 FGD2Q7Z6J4 655 aa17.81■□□□□ 0.44
CCM2-203ENST00000461377 COMMD2Q86X83 199 aa17.81■□□□□ 0.44
CCM2-203ENST00000461377 OR2M7Q8NG81 312 aa17.81■□□□□ 0.44
CCM2-203ENST00000461377 OR11H7Q8NGC8 314 aa17.81■□□□□ 0.44
CCM2-203ENST00000461377 ROBO4Q8WZ75 1007 aa17.81■□□□□ 0.44
CCM2-203ENST00000461377 UTP23Q9BRU9 249 aaKnown RBP17.81■□□□□ 0.44
CCM2-203ENST00000461377 PAQR5Q9NXK6 330 aaPredicted RBP17.81■□□□□ 0.44
CCM2-203ENST00000461377 FAM172BPA6NC97 362 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 OR5H15A6NDH6 313 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 PRAF2O60831 178 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 IGLV3-1P01715 115 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 NTF4P34130 210 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 FAUP35544 74 aaKnown RBP17.8■□□□□ 0.44
CCM2-203ENST00000461377 FAPQ12884 760 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 FAM27BQ5VT28 67 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 OR10K2Q6IF99 312 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 LRRC18Q8N456 261 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 ZNF775Q96BV0 537 aaPredicted RBP17.8■□□□□ 0.44
CCM2-203ENST00000461377 ZNF837Q96EG3 531 aaPredicted RBP17.8■□□□□ 0.44
CCM2-203ENST00000461377 OR10A4Q9H209 315 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 ABI3Q9P2A4 366 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 IL17BQ9UHF5 180 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 RAB22AQ9UL26 194 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 SLC5A6Q9Y289 635 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 STMND1H3BQB6 276 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 LINC01387J3KSC0 135 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 BPNT1O95861 308 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 ERCC1P07992 297 aaPredicted RBP17.8■□□□□ 0.44
CCM2-203ENST00000461377 ABOP16442 354 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 ZNF627Q7L945 461 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 OR5AS1Q8N127 324 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 OR4C16Q8NGL9 310 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 FAM71F1Q96KD3 344 aaPredicted RBP17.8■□□□□ 0.44
CCM2-203ENST00000461377 ZNF703Q9H7S9 590 aaPredicted RBP17.8■□□□□ 0.44
CCM2-203ENST00000461377 SCPEP1Q9HB40 452 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 NOX3Q9HBY0 568 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 MYEF2Q9P2K5 600 aaKnown RBP17.8■□□□□ 0.44
CCM2-203ENST00000461377 BOLA1Q9Y3E2 137 aa17.8■□□□□ 0.44
CCM2-203ENST00000461377 E9PLN8 166 aa17.79■□□□□ 0.44
CCM2-203ENST00000461377 ARPC1BO15143 372 aaKnown RBP17.79■□□□□ 0.44
CCM2-203ENST00000461377 NDUFB6O95139 128 aa17.79■□□□□ 0.44
CCM2-203ENST00000461377 ITGA3P26006 1051 aa17.79■□□□□ 0.44
CCM2-203ENST00000461377 OTX1P32242 354 aaPredicted RBP17.79■□□□□ 0.44
CCM2-203ENST00000461377 VEGFCP49767 419 aa17.79■□□□□ 0.44
CCM2-203ENST00000461377 QRFPP83859 136 aa17.79■□□□□ 0.44
CCM2-203ENST00000461377 PMPCAQ10713 525 aa17.79■□□□□ 0.44
CCM2-203ENST00000461377 AIMP2Q13155 320 aaKnown RBP17.79■□□□□ 0.44
CCM2-203ENST00000461377 SLC25A25Q6KCM7 469 aa17.79■□□□□ 0.44
CCM2-203ENST00000461377 PGAP1Q75T13 922 aa17.79■□□□□ 0.44
CCM2-203ENST00000461377 SUMF1Q8NBK3 374 aa17.79■□□□□ 0.44
CCM2-203ENST00000461377 BEST4Q8NFU0 473 aa17.79■□□□□ 0.44
CCM2-203ENST00000461377 OR14K1Q8NGZ2 314 aa17.79■□□□□ 0.44
CCM2-203ENST00000461377 PGAM5Q96HS1 289 aa17.79■□□□□ 0.44
CCM2-203ENST00000461377 IP6K3Q96PC2 410 aa17.79■□□□□ 0.44
CCM2-203ENST00000461377 B3GNT4Q9C0J1 378 aa17.79■□□□□ 0.44
CCM2-203ENST00000461377 PLSCR3Q9NRY6 295 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms