RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 YIPF3Q9GZM5 350 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 TOR3AQ9H497 397 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 PNRC2Q9NPJ4 139 aaKnown RBP11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 CYSLTR2Q9NS75 346 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 DDX28Q9NUL7 540 aaKnown RBP11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 IMPAD1Q9NX62 359 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 CGGBP1Q9UFW8 167 aaPredicted RBP11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 TMEM14AQ9Y6G1 99 aa11.32□□□□□ -0.6
RAB11FIP3-207ENST00000461009 JMJD1CQ15652 2540 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 PLSCR5A0PG75 271 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 SLC22A31A6NKX4 558 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 M0R135 149 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 TGFAP01135 160 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 LCATP04180 440 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 LYNP07948 512 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ACSM4P0C7M7 580 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ANPEPP15144 967 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 GIFP27352 417 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ALDH3B1P43353 468 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 SLC6A9P48067 706 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 RSPO1Q2MKA7 263 aaPredicted RBP11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 KRTAP27-1Q3LI81 207 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ZMAT1Q5H9K5 638 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 AADACL4Q5VUY2 407 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 DRAM2Q6UX65 266 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 SLC16A9Q7RTY1 509 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ZCCHC24Q8N2G6 241 aaKnown RBP11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 OR10S1Q8NGN2 331 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 OTOSQ8NHW6 89 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ST7LQ8TDW4 575 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 TMEM158Q8WZ71 300 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 HPS1Q92902 700 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 RFKQ969G6 155 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 CMBLQ96DG6 245 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ZNF799Q96GE5 643 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 KCNJ15Q99712 375 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 MDFIQ99750 246 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 SLC29A1Q99808 456 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 C1QTNF5Q9BXJ0 243 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 WARS2Q9UGM6 360 aaKnown RBP11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 LAMP5Q9UJQ1 280 aa11.31□□□□□ -0.6
RAB11FIP3-207ENST00000461009 IGHV4-61A0A0C4DH41 118 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 RNF212BA8MTL3 300 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 TIMM8AO60220 97 aaPredicted RBP11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 SELENOFO60613 162 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 H2BFMP0C1H6 154 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 RAC2P15153 192 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 SELEP16581 610 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 SRD5A1P18405 259 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 HSD11B1P28845 292 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 MPV17P39210 176 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ZNF81P51508 661 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 PRKXP51817 358 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 TMED1Q13445 227 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 MAD2L1BPQ15013 274 aaPredicted RBP11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 TRIP10Q15642 601 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 PCGF3Q3KNV8 242 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 COLCA1Q6ZS62 124 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ZNF283Q8N7M2 679 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ZNF555Q8NEP9 628 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 FAM81AQ8TBF8 368 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 RNF133Q8WVZ7 376 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ASB17Q8WXJ9 295 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 HAVCR1Q96D42 359 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 RDH12Q96NR8 316 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 MNTQ99583 582 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ABHD6Q9BV23 337 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 TPK1Q9H3S4 243 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 DCLRE1BQ9H816 532 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 CHODLQ9H9P2 273 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 HAO2Q9NYQ3 351 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 NKIRAS2Q9NYR9 191 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 PTTG3PQ9NZH4 202 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 MYEF2Q9P2K5 600 aaKnown RBP11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 GMPPBQ9Y5P6 360 aa11.3□□□□□ -0.6
RAB11FIP3-207ENST00000461009 CCDC182A6NF36 153 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 SNTNA6NMZ2 147 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 C17orf100A8MU93 164 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 M0R129 80 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 NAT2P11245 290 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ALOX5APP20292 161 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 KITLGP21583 273 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 PCMT1P22061 227 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 OTX1P32242 354 aaPredicted RBP11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 NAA10P41227 235 aaPredicted RBP11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 POU4F2Q12837 409 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 PSG7Q13046 419 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 ALKBH6Q3KRA9 238 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 FAM209AQ5JX71 171 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 KCTD18Q6PI47 426 aaPredicted RBP11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 DEGS2Q6QHC5 323 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 FBXW12Q6X9E4 464 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 SPATC1Q76KD6 591 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 KRT77Q7Z794 578 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 PACRGLQ8N7B6 248 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 RDH5Q92781 318 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 MSI2Q96DH6 328 aaKnown RBP11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 DIRC2Q96SL1 478 aa11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 CNN2Q99439 309 aaKnown RBP11.29□□□□□ -0.6
RAB11FIP3-207ENST00000461009 NIPAL2Q9H841 368 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms