RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 ACTC1P68032 377 aa19.28■□□□□ 0.68
C9orf3-209ENST00000460573 ACTA1P68133 377 aa19.28■□□□□ 0.68
C9orf3-209ENST00000460573 ZNF91Q05481 1191 aa19.28■□□□□ 0.68
C9orf3-209ENST00000460573 EGR3Q06889 387 aa19.28■□□□□ 0.68
C9orf3-209ENST00000460573 ZNF679Q8IYX0 411 aa19.28■□□□□ 0.68
C9orf3-209ENST00000460573 TRMT61AQ96FX7 289 aaKnown RBP19.28■□□□□ 0.68
C9orf3-209ENST00000460573 OR8B4Q96RC9 309 aa19.28■□□□□ 0.68
C9orf3-209ENST00000460573 DOK1Q99704 481 aa19.28■□□□□ 0.68
C9orf3-209ENST00000460573 OR2J1Q9GZK6 312 aa19.28■□□□□ 0.68
C9orf3-209ENST00000460573 SLCO1C1Q9NYB5 712 aa19.28■□□□□ 0.68
C9orf3-209ENST00000460573 DUSP13Q9UII6 198 aa19.28■□□□□ 0.68
C9orf3-209ENST00000460573 EXOGQ9Y2C4 368 aaKnown RBP19.28■□□□□ 0.68
C9orf3-209ENST00000460573 KLHDC2Q9Y2U9 406 aa19.28■□□□□ 0.68
C9orf3-209ENST00000460573 IGHV3-13P01766 116 aa19.27■□□□□ 0.68
C9orf3-209ENST00000460573 DBTP11182 482 aaKnown RBP19.27■□□□□ 0.68
C9orf3-209ENST00000460573 FOSL1P15407 271 aa19.27■□□□□ 0.68
C9orf3-209ENST00000460573 RAB40BQ12829 278 aa19.27■□□□□ 0.68
C9orf3-209ENST00000460573 MALLQ13021 153 aa19.27■□□□□ 0.68
C9orf3-209ENST00000460573 MSMPQ1L6U9 139 aa19.27■□□□□ 0.68
C9orf3-209ENST00000460573 KLHL22Q53GT1 634 aa19.27■□□□□ 0.68
C9orf3-209ENST00000460573 Q5PR19 223 aa19.27■□□□□ 0.68
C9orf3-209ENST00000460573 ZNF322Q6U7Q0 402 aaPredicted RBP19.27■□□□□ 0.68
C9orf3-209ENST00000460573 LRRN1Q6UXK5 716 aa19.27■□□□□ 0.68
C9orf3-209ENST00000460573 IZUMO2Q6UXV1 221 aa19.27■□□□□ 0.68
C9orf3-209ENST00000460573 THAP5Q7Z6K1 395 aa19.27■□□□□ 0.68
C9orf3-209ENST00000460573 LRRC75A-AS1Q8N1F1 130 aa19.27■□□□□ 0.68
C9orf3-209ENST00000460573 KLF14Q8TD94 323 aaPredicted RBP19.27■□□□□ 0.68
C9orf3-209ENST00000460573 MYCBPQ99417 103 aaPredicted RBP19.27■□□□□ 0.68
C9orf3-209ENST00000460573 MRPS18AQ9NVS2 196 aaKnown RBP19.27■□□□□ 0.68
C9orf3-209ENST00000460573 RTTNQ86VV8 2226 aa19.27■□□□□ 0.67
C9orf3-209ENST00000460573 FADS2O95864 444 aaKnown RBP19.26■□□□□ 0.67
C9orf3-209ENST00000460573 GNAO1P09471 354 aa19.26■□□□□ 0.67
C9orf3-209ENST00000460573 CX3CR1P49238 355 aa19.26■□□□□ 0.67
C9orf3-209ENST00000460573 PPOXP50336 477 aa19.26■□□□□ 0.67
C9orf3-209ENST00000460573 SPATA46Q5T0L3 261 aa19.26■□□□□ 0.67
C9orf3-209ENST00000460573 C6orf52Q5T4I8 152 aa19.26■□□□□ 0.67
C9orf3-209ENST00000460573 FBXW12Q6X9E4 464 aa19.26■□□□□ 0.67
C9orf3-209ENST00000460573 NAA40Q86UY6 237 aa19.26■□□□□ 0.67
C9orf3-209ENST00000460573 OR10H4Q8NGA5 316 aa19.26■□□□□ 0.67
C9orf3-209ENST00000460573 CNIH3Q8TBE1 160 aa19.26■□□□□ 0.67
C9orf3-209ENST00000460573 LGALS12Q96DT0 336 aa19.26■□□□□ 0.67
C9orf3-209ENST00000460573 PERPQ96FX8 193 aa19.26■□□□□ 0.67
C9orf3-209ENST00000460573 SYT3Q9BQG1 590 aa19.26■□□□□ 0.67
C9orf3-209ENST00000460573 CACNG6Q9BXT2 260 aa19.26■□□□□ 0.67
C9orf3-209ENST00000460573 GSX2Q9BZM3 304 aa19.26■□□□□ 0.67
C9orf3-209ENST00000460573 ZNF701Q9NV72 531 aaPredicted RBP19.26■□□□□ 0.67
C9orf3-209ENST00000460573 LRP12Q9Y561 859 aa19.26■□□□□ 0.67
C9orf3-209ENST00000460573 A0A1W2PQL4 384 aaPredicted RBP19.25■□□□□ 0.67
C9orf3-209ENST00000460573 IRGMA1A4Y4 181 aa19.25■□□□□ 0.67
C9orf3-209ENST00000460573 ACOD1A6NK06 481 aa19.25■□□□□ 0.67
C9orf3-209ENST00000460573 H7C417 338 aa19.25■□□□□ 0.67
C9orf3-209ENST00000460573 J3QRE1 110 aa19.25■□□□□ 0.67
C9orf3-209ENST00000460573 APOL3O95236 402 aa19.25■□□□□ 0.67
C9orf3-209ENST00000460573 RAC2P15153 192 aa19.25■□□□□ 0.67
C9orf3-209ENST00000460573 RIDAP52758 137 aaKnown RBP19.25■□□□□ 0.67
C9orf3-209ENST00000460573 CDK5R2Q13319 367 aa19.25■□□□□ 0.67
C9orf3-209ENST00000460573 LRP11Q86VZ4 500 aa19.25■□□□□ 0.67
C9orf3-209ENST00000460573 OR52H1Q8NGJ2 320 aa19.25■□□□□ 0.67
C9orf3-209ENST00000460573 FBLIM1Q8WUP2 373 aa19.25■□□□□ 0.67
C9orf3-209ENST00000460573 MS4A5Q9H3V2 200 aa19.25■□□□□ 0.67
C9orf3-209ENST00000460573 AMBNQ9NP70 447 aa19.25■□□□□ 0.67
C9orf3-209ENST00000460573 IKZF2Q9UKS7 526 aa19.25■□□□□ 0.67
C9orf3-209ENST00000460573 FZR1Q9UM11 496 aa19.25■□□□□ 0.67
C9orf3-209ENST00000460573 A0A1W2PPW3 197 aa19.24■□□□□ 0.67
C9orf3-209ENST00000460573 CLPTM1O96005 669 aa19.24■□□□□ 0.67
C9orf3-209ENST00000460573 MT-ND5P03915 603 aa19.24■□□□□ 0.67
C9orf3-209ENST00000460573 ANXA2P07355 339 aaKnown RBP19.24■□□□□ 0.67
C9orf3-209ENST00000460573 LIPAP38571 399 aa19.24■□□□□ 0.67
C9orf3-209ENST00000460573 PLEKHG7Q6ZR37 379 aa19.24■□□□□ 0.67
C9orf3-209ENST00000460573 EGFL6Q8IUX8 553 aa19.24■□□□□ 0.67
C9orf3-209ENST00000460573 ACBD7Q8N6N7 88 aa19.24■□□□□ 0.67
C9orf3-209ENST00000460573 HAVCR1Q96D42 359 aa19.24■□□□□ 0.67
C9orf3-209ENST00000460573 MRPL48Q96GC5 212 aaKnown RBP19.24■□□□□ 0.67
C9orf3-209ENST00000460573 C18orf12Q96KH6 178 aa19.24■□□□□ 0.67
C9orf3-209ENST00000460573 TBX5Q99593 518 aa19.24■□□□□ 0.67
C9orf3-209ENST00000460573 OPA3Q9H6K4 179 aa19.24■□□□□ 0.67
C9orf3-209ENST00000460573 INPP5EQ9NRR6 644 aa19.24■□□□□ 0.67
C9orf3-209ENST00000460573 TAAR3PQ9P1P4 343 aa19.24■□□□□ 0.67
C9orf3-209ENST00000460573 CGGBP1Q9UFW8 167 aaPredicted RBP19.24■□□□□ 0.67
C9orf3-209ENST00000460573 DAPL1A0PJW8 107 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 M0R233 179 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 XRCC2O43543 280 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 SULT1C4O75897 302 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 KRT8P05787 483 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 SELEP16581 610 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 KITLGP21583 273 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 CDKN1AP38936 164 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 MPV17P39210 176 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 ZNF121P58317 390 aaPredicted RBP19.23■□□□□ 0.67
C9orf3-209ENST00000460573 PSMA6P60900 246 aaKnown RBP19.23■□□□□ 0.67
C9orf3-209ENST00000460573 SMN1Q16637 294 aaKnown RBP19.23■□□□□ 0.67
C9orf3-209ENST00000460573 NKPD1Q17RQ9 610 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 ZNF829Q3KNS6 432 aaPredicted RBP19.23■□□□□ 0.67
C9orf3-209ENST00000460573 PRSS45Q7RTY3 260 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 KCTD20Q7Z5Y7 419 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 BIVMQ86UB2 503 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 SNX33Q8WV41 574 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 CMBLQ96DG6 245 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 ANKRD60Q9BZ19 345 aa19.23■□□□□ 0.67
C9orf3-209ENST00000460573 GSX1Q9H4S2 264 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms