RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 NOTCH1P46531 2555 aa17.95■□□□□ 0.46
CPNE1-220ENST00000458038 ARPC3O15145 178 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 HOXA3O43365 443 aaPredicted RBP17.94■□□□□ 0.46
CPNE1-220ENST00000458038 RENP00797 406 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 ACSM4P0C7M7 580 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 MDKP21741 143 aaPredicted RBP17.94■□□□□ 0.46
CPNE1-220ENST00000458038 FXYD6P3P58550 94 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 GK2Q14410 553 aaPredicted RBP17.94■□□□□ 0.46
CPNE1-220ENST00000458038 KRT72Q14CN4 511 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 MEP1BQ16820 701 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 CORO6Q6QEF8 472 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 JAZF1Q86VZ6 243 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 PLPP7Q8NBV4 271 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 SLC26A10Q8NG04 563 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 OR2AJ1Q8NGZ0 328 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 OR4F5Q8NH21 305 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 TSSK2Q96PF2 358 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 ATF6BQ99941 703 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 CDADC1Q9BWV3 514 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 SRA1Q9HD15 236 aaKnown RBP17.94■□□□□ 0.46
CPNE1-220ENST00000458038 TRIM36Q9NQ86 728 aa17.94■□□□□ 0.46
CPNE1-220ENST00000458038 DCTN6O00399 190 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 IDH3BO43837 385 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 CCDC22O60826 627 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 PPP1R3DO95685 299 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 KNG1P01042 644 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 HLA-DPB1P04440 258 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 H2AFXP16104 143 aaPredicted RBP17.93■□□□□ 0.46
CPNE1-220ENST00000458038 PSMB10P40306 273 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 RPL15P61313 204 aaKnown RBP17.93■□□□□ 0.46
CPNE1-220ENST00000458038 FGF12P61328 243 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 DEFA6Q01524 100 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 SF3A3Q12874 501 aaKnown RBP eCLIP17.93■□□□□ 0.463e-8■■■□□ 15.3
CPNE1-220ENST00000458038 MAB21L1Q13394 359 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 DEFB112Q30KQ8 113 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 RFX4Q33E94 735 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 ZNF841Q6ZN19 808 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 PGAP1Q75T13 922 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.93■□□□□ 0.46
CPNE1-220ENST00000458038 OR6V1Q8N148 313 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 SPRYD4Q8WW59 207 aaPredicted RBP17.93■□□□□ 0.46
CPNE1-220ENST00000458038 C7orf34Q96L11 122 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 DHRS1Q96LJ7 313 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 WDR76Q9H967 626 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 KCNG2Q9UJ96 466 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 SAMD4AQ9UPU9 718 aaKnown RBP17.93■□□□□ 0.46
CPNE1-220ENST00000458038 POMT1Q9Y6A1 747 aa17.93■□□□□ 0.46
CPNE1-220ENST00000458038 IGHV3-64DA0A0J9YX35 117 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 F5H5K5 113 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 P2RY10O00398 339 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 NDUFA2O43678 99 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 LCATP04180 440 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 SLC6A6P31641 620 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 RAD23AP54725 363 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 TPTEP56180 551 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 C11orf91Q3C1V1 193 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 FAM201AQ5SY85 155 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 SLC18B1Q6NT16 456 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 BRD3OSQ6XYD6 125 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 Q6YL49 198 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 ZBTB46Q86UZ6 589 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 FN3KRPQ9HA64 309 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 DCAF13Q9NV06 445 aaKnown RBP17.92■□□□□ 0.46
CPNE1-220ENST00000458038 ERVK-18Q9QC07 812 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 RNF7Q9UBF6 113 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 CYB5R1Q9UHQ9 305 aa17.92■□□□□ 0.46
CPNE1-220ENST00000458038 SOX21Q9Y651 276 aaPredicted RBP17.92■□□□□ 0.46
CPNE1-220ENST00000458038 TRBV4-1A0A0J9YWV2 114 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 FAM181BA6NEQ2 426 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 GMDSO60547 372 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 FAM20BO75063 409 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 GMNNO75496 209 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 NDUFA7O95182 113 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 TRAP1Q12931 704 aaKnown RBP17.91■□□□□ 0.46
CPNE1-220ENST00000458038 SEC23BQ15437 767 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 OR8G1Q15617 311 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 CLEC12AQ5QGZ9 265 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 LYPD2Q6UXB3 125 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 C17orf107Q6ZR85 190 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 FANK1Q8TC84 345 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 NMNAT3Q96T66 252 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 FUZQ9BT04 418 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 CCDC134Q9H6E4 229 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 ABCD2Q9UBJ2 740 aa17.91■□□□□ 0.46
CPNE1-220ENST00000458038 MDFIC2A0A1B0GVS7 189 aa17.9■□□□□ 0.46
CPNE1-220ENST00000458038 ZNF879B4DU55 563 aa17.9■□□□□ 0.46
CPNE1-220ENST00000458038 PTBP3O95758 552 aaKnown RBP17.9■□□□□ 0.46
CPNE1-220ENST00000458038 NCK1P16333 377 aa17.9■□□□□ 0.46
CPNE1-220ENST00000458038 NOS3P29474 1203 aa17.9■□□□□ 0.46
CPNE1-220ENST00000458038 RAG2P55895 527 aa17.9■□□□□ 0.46
CPNE1-220ENST00000458038 GLYATQ6IB77 296 aa17.9■□□□□ 0.46
CPNE1-220ENST00000458038 CFAP77Q6ZQR2 320 aa17.9■□□□□ 0.46
CPNE1-220ENST00000458038 MRPL21Q7Z2W9 205 aaKnown RBP17.9■□□□□ 0.46
CPNE1-220ENST00000458038 PNLDC1Q8NA58 520 aaKnown RBP17.9■□□□□ 0.46
CPNE1-220ENST00000458038 SPERTQ8NA61 448 aa17.9■□□□□ 0.46
CPNE1-220ENST00000458038 SPTSSAQ969W0 71 aa17.9■□□□□ 0.46
CPNE1-220ENST00000458038 SLCO4A1Q96BD0 722 aa17.9■□□□□ 0.46
CPNE1-220ENST00000458038 OR52D1Q9H346 318 aa17.9■□□□□ 0.46
CPNE1-220ENST00000458038 RPRD1BQ9NQG5 326 aaKnown RBP17.9■□□□□ 0.46
CPNE1-220ENST00000458038 C22orf46C9J442 243 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms