RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 NAA40Q86UY6 237 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FAM90A1Q86YD7 464 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GLB1L2Q8IW92 636 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FAM216BQ8N7L0 139 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FAM86B1Q8N7N1 296 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR13G1Q8NGZ3 307 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FANK1Q8TC84 345 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 C17orf50Q8WW18 174 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SSMEM1Q8WWF3 244 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 LIPHQ8WWY8 451 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GATAD2BQ8WXI9 593 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ITPKCQ96DU7 683 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PLEKHA8Q96JA3 519 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 HSH2DQ96JZ2 352 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZNF582Q96NG8 517 aaPredicted RBP4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 WDFY2Q96P53 400 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TMEM120AQ9BXJ8 343 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 NUAK2Q9H093 628 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SIRPDQ9H106 197 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PPP1R3EQ9H7J1 279 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ACOXLQ9NUZ1 547 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GRHPRQ9UBQ7 328 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MIOXQ9UGB7 285 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 BAG5Q9UL15 447 aa4.95□□□□□ -1.62
HLA-DPA3-207ENST00000454398 IGLV1-36A0A0B4J1U3 117 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TNFRSF13BO14836 293 aaPredicted RBP4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TIMM23O14925 209 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PIN1P1O15428 100 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 IFNW1P05000 195 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ACSM4P0C7M7 580 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PPIAL4GP0DN37 164 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 COX5BP10606 129 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 IRF2P14316 349 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 NCK1P16333 377 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PSMB10P40306 273 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CDKN2AP42771 156 aaKnown RBP4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RAD23AP54725 363 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ST3GAL3Q11203 375 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 IKZF1Q13422 519 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TRAM2Q15035 370 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PDCD1Q15116 288 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SEC23BQ15437 767 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR8G1Q15617 311 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FAM189A2Q15884 450 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RSPO1Q2MKA7 263 aaPredicted RBP4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 C2orf68Q2NKX9 166 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 BEAN1Q3B7T3 259 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 METTL11BQ5VVY1 283 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 MRPL21Q7Z2W9 205 aaKnown RBP4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TSEN54Q7Z6J9 526 aaKnown RBP4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 WDR86Q86TI4 376 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR2T12Q8NG77 320 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 OR11L1Q8NGX0 322 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RASSF5Q8WWW0 418 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 APOBEC3DQ96AK3 386 aaPredicted RBP4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SLCO4A1Q96BD0 722 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RCN3Q96D15 328 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RSRC1Q96IZ7 334 aaKnown RBP4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZNF583Q96ND8 569 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FNDC11Q9BVV2 318 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 HDHD2Q9H0R4 259 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RABEP2Q9H5N1 569 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ELL3Q9HB65 397 aaPredicted RBP4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PNRC2Q9NPJ4 139 aaKnown RBP4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 RPRD1BQ9NQG5 326 aaKnown RBP4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 C1orf123Q9NWV4 160 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 VSX1Q9NZR4 365 aaPredicted RBP4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 FOXJ3Q9UPW0 622 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 AURKCQ9UQB9 309 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 N6AMT1Q9Y5N5 214 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 IER3IP1Q9Y5U9 82 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 COL7A1Q02388 2944 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TENM3Q9P273 2699 aa4.94□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZNF816-ZNF321PA0A0X1KG74 233 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 LOC100653049A0A140TA62 436 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TVP23AA6NH52 213 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 LGALS8O00214 317 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 P2RY10O00398 339 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 DVL1O14640 695 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 KHDRBS3O75525 346 aaKnown RBP4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 KRT34O76011 436 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SERPINA1P01009 418 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 IGF2P01344 180 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 LCATP04180 440 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GRPP07492 148 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CSF1P09603 554 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SDHAP31040 664 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PYCR1P32322 319 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 KDELR2P33947 212 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 SAA4P35542 130 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 GATA4P43694 442 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 IER3P46695 156 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 ZNF92Q03936 586 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PRKCDQ05655 676 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 COX10Q12887 443 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 TRAP1Q12931 704 aaKnown RBP4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 CYLC2Q14093 348 aaPredicted RBP4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 HABP2Q14520 560 aaPredicted RBP4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 LY6EQ16553 131 aa4.93□□□□□ -1.62
HLA-DPA3-207ENST00000454398 PCK2Q16822 640 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms