RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 PLAUP00749 431 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 MT-ND5P03915 603 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 LCKP06239 509 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 H2BFMP0C1H6 154 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 ACSM4P0C7M7 580 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 DANCRP0C864 163 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 PAX1P15863 534 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 HSD11B1P28845 292 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 LIPAP38571 399 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 OPRL1P41146 370 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 NAA10P41227 235 aaPredicted RBP7.5□□□□□ -1.21
COL28A1-205ENST00000453441 ISL1P61371 349 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 SNRPD2P62316 118 aaKnown RBP7.5□□□□□ -1.21
COL28A1-205ENST00000453441 MED21Q13503 144 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 ZNF718Q3SXZ3 478 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 KLHL22Q53GT1 634 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 ZMAT1Q5H9K5 638 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 IZUMO2Q6UXV1 221 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 B3GLCTQ6Y288 498 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 COLCA1Q6ZS62 124 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 USP51Q70EK9 711 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 THAP5Q7Z6K1 395 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 KRT77Q7Z794 578 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 CDH24Q86UP0 819 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 SLC35F2Q8IXU6 374 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 OR52H1Q8NGJ2 320 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 OR51G2Q8NGK0 314 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 MRPL24Q96A35 216 aaKnown RBP7.5□□□□□ -1.21
COL28A1-205ENST00000453441 RNFT2Q96EX2 444 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 ZNF799Q96GE5 643 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 OR8B4Q96RC9 309 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 CCL19Q99731 98 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 C1QTNF5Q9BXJ0 243 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 RGCCQ9H4X1 137 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 Q9H521 79 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 MOB1AQ9H8S9 216 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 CENPMQ9NSP4 180 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 MRPS18AQ9NVS2 196 aaKnown RBP7.5□□□□□ -1.21
COL28A1-205ENST00000453441 SLCO1C1Q9NYB5 712 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 ZNF391Q9UJN7 358 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 RAB26Q9ULW5 256 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 EXOGQ9Y2C4 368 aaKnown RBP7.5□□□□□ -1.21
COL28A1-205ENST00000453441 PMF1-BGLAPU3KQ54 211 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 SETXQ7Z333 2677 aaKnown RBP7.49□□□□□ -1.21
COL28A1-205ENST00000453441 HRNRQ86YZ3 2850 aaPredicted RBP7.49□□□□□ -1.21
COL28A1-205ENST00000453441 IGLV3-9A0A075B6K5 115 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 F5H5K5 113 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 XRCC2O43543 280 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 SULT1C4O75897 302 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 KRT8P05787 483 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 ERCC1P07992 297 aaPredicted RBP7.49□□□□□ -1.21
COL28A1-205ENST00000453441 MRPL3P09001 348 aaKnown RBP7.49□□□□□ -1.21
COL28A1-205ENST00000453441 OR4A8P0C604 315 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 DBTP11182 482 aaKnown RBP7.49□□□□□ -1.21
COL28A1-205ENST00000453441 ZNF250P15622 560 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 SELEP16581 610 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 CFL1P23528 166 aaKnown RBP7.49□□□□□ -1.21
COL28A1-205ENST00000453441 GCH1P30793 250 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 THBS4P35443 961 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 WNT5AP41221 380 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 AQP4P55087 323 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 KLF3P57682 345 aaPredicted RBP7.49□□□□□ -1.21
COL28A1-205ENST00000453441 CXCR4P61073 352 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 PPP1CBP62140 327 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 ACTA2P62736 377 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 ACTG2P63267 376 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 ZNF91Q05481 1191 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 MALLQ13021 153 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 MRPL28Q13084 256 aaKnown RBP7.49□□□□□ -1.21
COL28A1-205ENST00000453441 ADIPOQQ15848 244 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 SNCBQ16143 134 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 ZNF829Q3KNS6 432 aaPredicted RBP7.49□□□□□ -1.21
COL28A1-205ENST00000453441 FAM209AQ5JX71 171 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 MBNL2Q5VZF2 373 aaKnown RBP7.49□□□□□ -1.21
COL28A1-205ENST00000453441 KRT80Q6KB66 452 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 TMEM154Q6P9G4 183 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 ZNF322Q6U7Q0 402 aaPredicted RBP7.49□□□□□ -1.21
COL28A1-205ENST00000453441 PLEKHG7Q6ZR37 379 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 BCDIN3DQ7Z5W3 292 aaKnown RBP7.49□□□□□ -1.21
COL28A1-205ENST00000453441 KCTD20Q7Z5Y7 419 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 ZNF679Q8IYX0 411 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 LRRC75A-AS1Q8N1F1 130 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 PAQR4Q8N4S7 273 aaPredicted RBP7.49□□□□□ -1.21
COL28A1-205ENST00000453441 ACBD7Q8N6N7 88 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 OR10S1Q8NGN2 331 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 OR1J1Q8NGS3 322 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 ABHD4Q8TB40 342 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 SYNPRQ8TBG9 265 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 THEM6Q8WUY1 208 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 IGFBPL1Q8WX77 278 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 DOK1Q99704 481 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 TRAF4Q9BUZ4 470 aaPredicted RBP7.49□□□□□ -1.21
COL28A1-205ENST00000453441 JAM3Q9BX67 310 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 ANKRD60Q9BZ19 345 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 MS4A5Q9H3V2 200 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 PLK3Q9H4B4 646 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 CYSLTR2Q9NS75 346 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 PLCXD1Q9NUJ7 323 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 GRIP1Q9Y3R0 1128 aa7.49□□□□□ -1.21
COL28A1-205ENST00000453441 POLQO75417 2590 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms