RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 PCGF3Q3KNV8 242 aa17.01■□□□□ 0.31
COL9A3-202ENST00000452372 ZIK1Q3SY52 487 aaPredicted RBP17.01■□□□□ 0.31
COL9A3-202ENST00000452372 DRAM2Q6UX65 266 aa17.01■□□□□ 0.31
COL9A3-202ENST00000452372 FBXW12Q6X9E4 464 aa17.01■□□□□ 0.31
COL9A3-202ENST00000452372 SLC16A9Q7RTY1 509 aa17.01■□□□□ 0.31
COL9A3-202ENST00000452372 OR8J1Q8NGP2 316 aa17.01■□□□□ 0.31
COL9A3-202ENST00000452372 AMELYQ99218 206 aa17.01■□□□□ 0.31
COL9A3-202ENST00000452372 TOR3AQ9H497 397 aa17.01■□□□□ 0.31
COL9A3-202ENST00000452372 NKIRAS2Q9NYR9 191 aa17.01■□□□□ 0.31
COL9A3-202ENST00000452372 PTTG3PQ9NZH4 202 aa17.01■□□□□ 0.31
COL9A3-202ENST00000452372 PURGQ9UJV8 347 aaKnown RBP17.01■□□□□ 0.31
COL9A3-202ENST00000452372 MXRA5Q9NR99 2828 aa17■□□□□ 0.31
COL9A3-202ENST00000452372 IGHV4-30-2A0A087WSY4 118 aa17■□□□□ 0.31
COL9A3-202ENST00000452372 PLSCR5A0PG75 271 aa17■□□□□ 0.31
COL9A3-202ENST00000452372 SLC22A31A6NKX4 558 aa17■□□□□ 0.31
COL9A3-202ENST00000452372 LYNP07948 512 aa17■□□□□ 0.31
COL9A3-202ENST00000452372 NAA10P41227 235 aaPredicted RBP17■□□□□ 0.31
COL9A3-202ENST00000452372 ZNF81P51508 661 aa17■□□□□ 0.31
COL9A3-202ENST00000452372 PRKXP51817 358 aa17■□□□□ 0.31
COL9A3-202ENST00000452372 GGTLC2Q14390 218 aa17■□□□□ 0.31
COL9A3-202ENST00000452372 HLXQ14774 488 aaPredicted RBP17■□□□□ 0.31
COL9A3-202ENST00000452372 SPATC1Q76KD6 591 aa17■□□□□ 0.31
COL9A3-202ENST00000452372 GID4Q8IVV7 300 aa17■□□□□ 0.31
COL9A3-202ENST00000452372 C10orf105Q8TEF2 133 aa17■□□□□ 0.31
COL9A3-202ENST00000452372 UBASH3BQ8TF42 649 aa17■□□□□ 0.31
COL9A3-202ENST00000452372 THEM6Q8WUY1 208 aa17■□□□□ 0.31
COL9A3-202ENST00000452372 TRUB1Q8WWH5 349 aaKnown RBP17■□□□□ 0.31
COL9A3-202ENST00000452372 YIPF3Q9GZM5 350 aa17■□□□□ 0.31
COL9A3-202ENST00000452372 CUBNO60494 3623 aa17■□□□□ 0.31
COL9A3-202ENST00000452372 LOC390937A0A1W2PQ73 354 aa16.99■□□□□ 0.31
COL9A3-202ENST00000452372 NDUFS8O00217 210 aa16.99■□□□□ 0.31
COL9A3-202ENST00000452372 TIMM8AO60220 97 aaPredicted RBP16.99■□□□□ 0.31
COL9A3-202ENST00000452372 HPXP02790 462 aa16.99■□□□□ 0.31
COL9A3-202ENST00000452372 ANPEPP15144 967 aa16.99■□□□□ 0.31
COL9A3-202ENST00000452372 ALOX5APP20292 161 aa16.99■□□□□ 0.31
COL9A3-202ENST00000452372 OPRL1P41146 370 aa16.99■□□□□ 0.31
COL9A3-202ENST00000452372 MAGEB1P43366 347 aa16.99■□□□□ 0.31
COL9A3-202ENST00000452372 SLC6A9P48067 706 aa16.99■□□□□ 0.31
COL9A3-202ENST00000452372 ZNF786Q8N393 782 aa16.99■□□□□ 0.31
COL9A3-202ENST00000452372 GTF3AQ92664 365 aaKnown RBP16.99■□□□□ 0.31
COL9A3-202ENST00000452372 HAO2Q9NYQ3 351 aa16.99■□□□□ 0.31
COL9A3-202ENST00000452372 LAMP5Q9UJQ1 280 aa16.99■□□□□ 0.31
COL9A3-202ENST00000452372 CRLF1O75462 422 aa16.98■□□□□ 0.31
COL9A3-202ENST00000452372 APOC1P02654 83 aa16.98■□□□□ 0.31
COL9A3-202ENST00000452372 ADH4P08319 380 aa16.98■□□□□ 0.31
COL9A3-202ENST00000452372 SLC25A16P16260 332 aa16.98■□□□□ 0.31
COL9A3-202ENST00000452372 HCCSP53701 268 aa16.98■□□□□ 0.31
COL9A3-202ENST00000452372 MALLQ13021 153 aa16.98■□□□□ 0.31
COL9A3-202ENST00000452372 RCN1Q15293 331 aa16.98■□□□□ 0.31
COL9A3-202ENST00000452372 ZMAT1Q5H9K5 638 aa16.98■□□□□ 0.31
COL9A3-202ENST00000452372 ZNF283Q8N7M2 679 aa16.98■□□□□ 0.31
COL9A3-202ENST00000452372 FAM81AQ8TBF8 368 aa16.98■□□□□ 0.31
COL9A3-202ENST00000452372 MBOAT4Q96T53 435 aa16.98■□□□□ 0.31
COL9A3-202ENST00000452372 IMPAD1Q9NX62 359 aa16.98■□□□□ 0.31
COL9A3-202ENST00000452372 ZDHHC8Q9ULC8 765 aa16.98■□□□□ 0.31
COL9A3-202ENST00000452372 KLHDC2Q9Y2U9 406 aa16.98■□□□□ 0.31
COL9A3-202ENST00000452372 A0A096LNT2 108 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 ERICH4A6NGS2 130 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 ZSCAN5BA6NJL1 495 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 NCR1O76036 304 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 IGHV1-46P01743 117 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 MRPL3P09001 348 aaKnown RBP16.97■□□□□ 0.31
COL9A3-202ENST00000452372 H2BFMP0C1H6 154 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 GIFP27352 417 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 HSD11B1P28845 292 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 CCL8P80075 99 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 MRPS11P82912 194 aaKnown RBP16.97■□□□□ 0.31
COL9A3-202ENST00000452372 GK2Q14410 553 aaPredicted RBP16.97■□□□□ 0.31
COL9A3-202ENST00000452372 CARTPTQ16568 116 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 SNAI3Q3KNW1 292 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 FAM209AQ5JX71 171 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 OR2T2Q6IF00 324 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.97■□□□□ 0.31
COL9A3-202ENST00000452372 RDH5Q92781 318 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 UBE2FQ969M7 185 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 DIRC2Q96SL1 478 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 CNN2Q99439 309 aaKnown RBP16.97■□□□□ 0.31
COL9A3-202ENST00000452372 SP140LQ9H930 580 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 MSL2Q9HCI7 577 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 WARS2Q9UGM6 360 aaKnown RBP16.97■□□□□ 0.31
COL9A3-202ENST00000452372 TMEM14AQ9Y6G1 99 aa16.97■□□□□ 0.31
COL9A3-202ENST00000452372 VWC2LB2RUY7 222 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 LYNX1G3V0Z9 82 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 SPRY3O43610 288 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 LYNX1P0DP58 116 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 COL8A2P25067 703 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 HTR1FP30939 366 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 CX3CR1P49238 355 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 CDK5R2Q13319 367 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 TMED1Q13445 227 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 TRIP10Q15642 601 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 SLC25A30Q5SVS4 291 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 KCTD18Q6PI47 426 aaPredicted RBP16.96■□□□□ 0.31
COL9A3-202ENST00000452372 ZNF540Q8NDQ6 660 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 ZNF582Q96NG8 517 aaPredicted RBP16.96■□□□□ 0.31
COL9A3-202ENST00000452372 PIMREGQ9BSJ6 248 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 ADGRL4Q9HBW9 690 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 DECR2Q9NUI1 292 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 GMPPBQ9Y5P6 360 aa16.96■□□□□ 0.31
COL9A3-202ENST00000452372 STAB1Q9NY15 2570 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms