RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 OR2T33Q8NG76 320 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 MEGF10Q96KG7 1140 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 LRGUKQ96M69 825 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 CHID1Q9BWS9 393 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 PATZ1Q9HBE1 687 aaKnown RBP16.33■□□□□ 0.2
USP40-207ENST00000450940 COMMD3-BMI1R4GMX3 469 aa16.33■□□□□ 0.2
USP40-207ENST00000450940 TVP23AA6NH52 213 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 H0YL77 283 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 FSTL3O95633 263 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 LCATP04180 440 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 PSKH1P11801 424 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 HOXB6P17509 224 aaKnown RBP16.32■□□□□ 0.2
USP40-207ENST00000450940 RBMXP38159 391 aaKnown RBP16.32■□□□□ 0.2
USP40-207ENST00000450940 SRP9P49458 86 aaKnown RBP16.32■□□□□ 0.2
USP40-207ENST00000450940 MMP16P51512 607 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 BTG1P62324 171 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 SCGB2A2Q13296 93 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 ZNF181Q2M3W8 571 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 LYPD4Q6UWN0 246 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 SPICQ8N5J4 248 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 OR10G2Q8NGC3 310 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 OR51L1Q8NGJ5 315 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 OR9Q1Q8NGQ5 310 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 SPTSSAQ969W0 71 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 CCDC124Q96CT7 223 aaKnown RBP16.32■□□□□ 0.2
USP40-207ENST00000450940 THTPAQ9BU02 230 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 WDR76Q9H967 626 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 TMEM100Q9NV29 134 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 ARMC1Q9NVT9 282 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 UBAP1Q9NZ09 502 aa16.32■□□□□ 0.2
USP40-207ENST00000450940 F5H0A9 414 aaPredicted RBP16.31■□□□□ 0.2
USP40-207ENST00000450940 M0R135 149 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 FOXH1O75593 365 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 SOX14O95416 240 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 CST1P01037 141 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 SPI1P17947 270 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 CPT2P23786 658 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 ZFP36P26651 326 aaKnown RBP16.31■□□□□ 0.2
USP40-207ENST00000450940 FMO3P31513 532 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 RPS27P42677 84 aaKnown RBP16.31■□□□□ 0.2
USP40-207ENST00000450940 GATA4P43694 442 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 SLC6A9P48067 706 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 BLVRAP53004 296 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 MALLQ13021 153 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 DCAF12L2Q5VW00 463 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 SHQ1Q6PI26 577 aaKnown RBP16.31■□□□□ 0.2
USP40-207ENST00000450940 TRPM8Q7Z2W7 1104 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 C1QL2Q7Z5L3 287 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 KLHL36Q8N4N3 616 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 CELF2-AS1Q8N7Q2 184 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 OR10AD1Q8NGE0 317 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 ST7LQ8TDW4 575 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 GIPC3Q8TF64 312 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 CANT1Q8WVQ1 401 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 ZNF799Q96GE5 643 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 FEVQ99581 238 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 NIPSNAP1Q9BPW8 284 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 CMC2Q9NRP2 79 aa16.31■□□□□ 0.2
USP40-207ENST00000450940 DOCK11Q5JSL3 2073 aa16.3■□□□□ 0.2
USP40-207ENST00000450940 LOC105371242A0A075B767 164 aa16.3■□□□□ 0.2
USP40-207ENST00000450940 MDH2P40926 338 aaKnown RBP16.3■□□□□ 0.2
USP40-207ENST00000450940 ENTPD1P49961 510 aa16.3■□□□□ 0.2
USP40-207ENST00000450940 LCN2P80188 198 aa16.3■□□□□ 0.2
USP40-207ENST00000450940 LINC01590Q5TEZ4 76 aa16.3■□□□□ 0.2
USP40-207ENST00000450940 DRAM2Q6UX65 266 aa16.3■□□□□ 0.2
USP40-207ENST00000450940 DCXRQ7Z4W1 244 aa16.3■□□□□ 0.2
USP40-207ENST00000450940 ZNF511Q8NB15 262 aa16.3■□□□□ 0.2
USP40-207ENST00000450940 BHLHE23Q8NDY6 225 aa16.3■□□□□ 0.2
USP40-207ENST00000450940 SLCO4A1Q96BD0 722 aa16.3■□□□□ 0.2
USP40-207ENST00000450940 REPIN1Q9BWE0 567 aaKnown RBP16.3■□□□□ 0.2
USP40-207ENST00000450940 OPN4Q9UHM6 478 aa16.3■□□□□ 0.2
USP40-207ENST00000450940 PCDHB10Q9UN67 800 aa16.3■□□□□ 0.2
USP40-207ENST00000450940 DHRS12A0PJE2 317 aa16.29■□□□□ 0.2
USP40-207ENST00000450940 RIIAD1A6NNX1 92 aa16.29■□□□□ 0.2
USP40-207ENST00000450940 A8MXK9 166 aa16.29■□□□□ 0.2
USP40-207ENST00000450940 F5H5P2 479 aa16.29■□□□□ 0.2
USP40-207ENST00000450940 ZNF593O00488 134 aaPredicted RBP16.29■□□□□ 0.2
USP40-207ENST00000450940 FSHBP01225 129 aa16.29■□□□□ 0.2
USP40-207ENST00000450940 IFNGP01579 166 aa16.29■□□□□ 0.2
USP40-207ENST00000450940 GYPBP06028 91 aa16.29■□□□□ 0.2
USP40-207ENST00000450940 GRK5P34947 590 aa16.29■□□□□ 0.2
USP40-207ENST00000450940 PGAP1Q75T13 922 aa16.29■□□□□ 0.2
USP40-207ENST00000450940 TMEM179BQ7Z7N9 219 aa16.29■□□□□ 0.2
USP40-207ENST00000450940 MUC20Q8N307 709 aaPredicted RBP16.29■□□□□ 0.2
USP40-207ENST00000450940 SEMA6DQ8NFY4 1073 aa16.29■□□□□ 0.2
USP40-207ENST00000450940 MARCH7Q9H992 704 aa16.29■□□□□ 0.2
USP40-207ENST00000450940 TMEM165Q9HC07 324 aa16.29■□□□□ 0.2
USP40-207ENST00000450940 ANK2Q01484 3957 aa16.29■□□□□ 0.2
USP40-207ENST00000450940 WNT2P09544 360 aa16.28■□□□□ 0.2
USP40-207ENST00000450940 CLUP10909 449 aa16.28■□□□□ 0.2
USP40-207ENST00000450940 ZNF3P17036 446 aa16.28■□□□□ 0.2
USP40-207ENST00000450940 ANOS1P23352 680 aa16.28■□□□□ 0.2
USP40-207ENST00000450940 PMELP40967 661 aa16.28■□□□□ 0.2
USP40-207ENST00000450940 CD200P41217 278 aa16.28■□□□□ 0.2
USP40-207ENST00000450940 MAB21L1Q13394 359 aa16.28■□□□□ 0.2
USP40-207ENST00000450940 SNAI3Q3KNW1 292 aa16.28■□□□□ 0.2
USP40-207ENST00000450940 DNAL1Q4LDG9 190 aa16.28■□□□□ 0.2
USP40-207ENST00000450940 USP43Q70EL4 1123 aa16.28■□□□□ 0.2
USP40-207ENST00000450940 ZNF771Q7L3S4 317 aaPredicted RBP16.28■□□□□ 0.2
USP40-207ENST00000450940 ZNF420Q8TAQ5 688 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms