RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 RAB1AP62820 205 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 EMX1Q04741 257 aaPredicted RBP14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 SNTB2Q13425 540 aaKnown RBP14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 CARTPTQ16568 116 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 SLC36A2Q495M3 483 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 TEX30Q5JUR7 227 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 SYT9Q86SS6 491 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 ANKRD13BQ86YJ7 626 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 TIGD4Q8IY51 512 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 LRRC18Q8N456 261 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 NUP37Q8NFH4 326 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 C10orf105Q8TEF2 133 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 NABP1Q96AH0 204 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 SH3GL3Q99963 347 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 RNF121Q9H920 327 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 PAK1IP1Q9NWT1 392 aaPredicted RBP14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 ENPP5Q9UJA9 477 aa14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 EXOGQ9Y2C4 368 aaKnown RBP14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 SONP18583 2426 aaKnown RBP14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 CHD3Q12873 2000 aaKnown RBP14.68□□□□□ -0.06
PRPF40A-204ENST00000450303 PHYHO14832 338 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 CD5LO43866 347 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 UBL3O95164 117 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 MRPL3P09001 348 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 SPARCP09486 303 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 PIPP12273 146 aaPredicted RBP14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 ZNF14P17017 642 aaPredicted RBP14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 NAA10P41227 235 aaPredicted RBP14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 ACTC1P68032 377 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 ACTA1P68133 377 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 AQP6Q13520 282 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 EFNB3Q15768 340 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 TMEM53Q6P2H8 277 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 SLC35F2Q8IXU6 374 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 ZCCHC24Q8N2G6 241 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 ZNF454Q8N9F8 522 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 IL17RDQ8NFM7 739 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 GGHQ92820 318 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 LGALS12Q96DT0 336 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 MRPL48Q96GC5 212 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 DCUN1D5Q9BTE7 237 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 PLK3Q9H4B4 646 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 WDR76Q9H967 626 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 ADGRL4Q9HBW9 690 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 EMC7Q9NPA0 242 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 MRPL22Q9NWU5 206 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 CHCHD3Q9NX63 227 aaKnown RBP14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 JMJD1CQ15652 2540 aa14.67□□□□□ -0.06
PRPF40A-204ENST00000450303 TMEM129A0AVI4 362 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 VSTM5A8MXK1 200 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 ZNF670-ZNF695F2Z2N8 137 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 SLC22A1O15245 554 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 SELENOFO60613 162 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 RAB36O95755 333 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 CDK1P06493 297 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 OR2T7P0C7T2 308 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 SLC25A16P16260 332 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 NR4A1P22736 598 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 SLC15A1P46059 708 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 PDLIM4P50479 330 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 SCRN3Q0VDG4 424 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 DBPQ10586 325 aaPredicted RBP14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 TBCEQ15813 527 aaPredicted RBP14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 MEP1BQ16820 701 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 SYT6Q5T7P8 510 aaPredicted RBP14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 UBE2UQ5VVX9 321 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 SLC18B1Q6NT16 456 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 LYPD4Q6UWN0 246 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 GJC3Q8NFK1 279 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 OR2T27Q8NH04 317 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 SGCDQ92629 289 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 TMEM80Q96HE8 168 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 FUNDC2Q9BWH2 189 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 ZNF416Q9BWM5 594 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 C1orf198Q9H425 327 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 ZNF442Q9H7R0 627 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 FGF20Q9NP95 211 aaPredicted RBP14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 ACOT13Q9NPJ3 140 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 INPP5EQ9NRR6 644 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 LAMP5Q9UJQ1 280 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 TIMM10BQ9Y5J6 103 aa14.66□□□□□ -0.06
PRPF40A-204ENST00000450303 KIAA1324LA8MWY0 1029 aaPredicted RBP14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 CRLF1O75462 422 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 INMTO95050 263 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 SCG5P05408 212 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 ZNF35P13682 527 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 MAP2K4P45985 399 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 GP2P55259 537 aaKnown RBP14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 LOXL1Q08397 574 aaPredicted RBP14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 DCTN2Q13561 401 aaKnown RBP14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 EIF2B1Q14232 305 aaKnown RBP14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 ENDOGQ14249 297 aaKnown RBP14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 PCK2Q16822 640 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 MSMPQ1L6U9 139 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 TMEM249Q2WGJ8 235 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 DPY19L4Q7Z388 723 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 CROCCP3Q8IVE0 287 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 ACBD7Q8N6N7 88 aa14.65□□□□□ -0.06
PRPF40A-204ENST00000450303 OR10H4Q8NGA5 316 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms