RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	BNIP1	Q12981	228 aa		13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	ACSM5	Q6NUN0	579 aa		13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	SHQ1	Q6PI26	577 aa	Known RBP	13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	COLCA1	Q6ZS62	124 aa		13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	MRPL21	Q7Z2W9	205 aa	Known RBP	13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	OR10S1	Q8NGN2	331 aa		13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	OR13G1	Q8NGZ3	307 aa		13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	SLAMF6	Q96DU3	332 aa		13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	MDFI	Q99750	246 aa		13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	CADM1	Q9BY67	442 aa	Known RBP	13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	MED20	Q9H944	212 aa		13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	CENPM	Q9NSP4	180 aa		13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	DDX28	Q9NUL7	540 aa	Known RBP	13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	TMEM106B	Q9NUM4	274 aa		13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	UBAP1	Q9NZ09	502 aa		13.37	□□□□□ -0.27
HDLBP-223	ENST00000449864	TRAV20	A0A0B4J274	112 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	ZNF878	C9JN71	531 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	ZNF593	O00488	134 aa	Predicted RBP	13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	GSC2	O15499	205 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	IGHV2-5	P01817	119 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	PSKH1	P11801	424 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	SRP9	P49458	86 aa	Known RBP	13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	PRSS12	P56730	875 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	GK2	Q14410	553 aa	Predicted RBP	13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	GINS1	Q14691	196 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	DRAM2	Q6UX65	266 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	PGAP1	Q75T13	922 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	NAA40	Q86UY6	237 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	ERI1	Q8IV48	349 aa	Known RBP	13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	HS3ST5	Q8IZT8	346 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	ZNF283	Q8N7M2	679 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	PAPD5	Q8NDF8	572 aa	Known RBP	13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	OR6N2	Q8NGY6	317 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	PLEKHA8	Q96JA3	519 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	INTS14	Q96SY0	518 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	DCAF16	Q9NXF7	216 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	NPTN	Q9Y639	398 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	DOCK11	Q5JSL3	2073 aa		13.36	□□□□□ -0.27
HDLBP-223	ENST00000449864	ARHGAP32	A7KAX9	2087 aa		13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	RNF212B	A8MTL3	300 aa		13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	PRR23D1	E9PI22	279 aa	Predicted RBP	13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	PHF1	O43189	567 aa	Predicted RBP	13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	DEAF1	O75398	565 aa	Predicted RBP	13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	TIPRL	O75663	272 aa		13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	OSM	P13725	252 aa		13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	ANXA8	P13928	327 aa		13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	PRKACG	P22612	351 aa		13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	HNRNPA0	Q13151	305 aa	Known RBP	13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	EIF2B1	Q14232	305 aa	Known RBP	13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	SPATC1	Q76KD6	591 aa		13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	CXXC5	Q7LFL8	322 aa	Known RBP	13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	ST7L	Q8TDW4	575 aa		13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	SLCO4A1	Q96BD0	722 aa		13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	SLC30A2	Q9BRI3	323 aa		13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	TEX12	Q9BXU0	123 aa		13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	TMEM100	Q9NV29	134 aa		13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864	PCDHB10	Q9UN67	800 aa		13.35	□□□□□ -0.27
HDLBP-223	ENST00000449864		F5H5P2	479 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864		H0YL77	283 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	IFNL4	K9M1U5	179 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	MLNR	O43193	412 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	ATP5H	O75947	161 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	PNP	P00491	289 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	IGHV2-70	P01814	119 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	SBK2	P0C263	348 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	HSD11B1	P28845	292 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	GSTT1	P30711	240 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	OTX1	P32242	354 aa	Predicted RBP	13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	MMP16	P51512	607 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	PRKX	P51817	358 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	GRB2	P62993	217 aa	Known RBP	13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	PCK2	Q16822	640 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	SNAI3	Q3KNW1	292 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	TEX30	Q5JUR7	227 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	PLBD1	Q6P4A8	553 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	KLHL36	Q8N4N3	616 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	SPIC	Q8N5J4	248 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	OR2AE1	Q8NHA4	323 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	DNAJC9	Q8WXX5	260 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	MEGF10	Q96KG7	1140 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	KCNJ15	Q99712	375 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	OR51V1	Q9H2C8	321 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	N6AMT1	Q9Y5N5	214 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	COL6A5	A8TX70	2615 aa		13.34	□□□□□ -0.27
HDLBP-223	ENST00000449864	FBN1	P35555	2871 aa	Known RBP	13.33	□□□□□ -0.28
HDLBP-223	ENST00000449864	CUBN	O60494	3623 aa		13.33	□□□□□ -0.28
HDLBP-223	ENST00000449864		A0A0G2JMP0	313 aa		13.33	□□□□□ -0.28
HDLBP-223	ENST00000449864	IGHV3-64D	A0A0J9YX35	117 aa		13.33	□□□□□ -0.28
HDLBP-223	ENST00000449864		A0A0X1KG70	313 aa		13.33	□□□□□ -0.28
HDLBP-223	ENST00000449864	PLPP2	O43688	288 aa		13.33	□□□□□ -0.28
HDLBP-223	ENST00000449864	GLCE	O94923	617 aa		13.33	□□□□□ -0.28
HDLBP-223	ENST00000449864	HLA-DPB1	P04440	258 aa		13.33	□□□□□ -0.28
HDLBP-223	ENST00000449864	HMGN1	P05114	100 aa		13.33	□□□□□ -0.28
HDLBP-223	ENST00000449864	SLC2A1	P11166	492 aa		13.33	□□□□□ -0.28
HDLBP-223	ENST00000449864	THBS2	P35442	1172 aa		13.33	□□□□□ -0.28
HDLBP-223	ENST00000449864	SLC15A1	P46059	708 aa		13.33	□□□□□ -0.28
HDLBP-223	ENST00000449864	RAD23A	P54725	363 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms