RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	7.43	□□□□□ -1.22
HCG18-238	ENST00000449544	NANP	Q8TBE9	248 aa		7.43	□□□□□ -1.22
HCG18-238	ENST00000449544	ITLN2	Q8WWU7	325 aa	Predicted RBP	7.43	□□□□□ -1.22
HCG18-238	ENST00000449544	MAEL	Q96JY0	434 aa	Known RBP	7.43	□□□□□ -1.22
HCG18-238	ENST00000449544	PRDM14	Q9GZV8	571 aa		7.43	□□□□□ -1.22
HCG18-238	ENST00000449544	METTL9	Q9H1A3	318 aa		7.43	□□□□□ -1.22
HCG18-238	ENST00000449544	NOX3	Q9HBY0	568 aa		7.43	□□□□□ -1.22
HCG18-238	ENST00000449544	SLC17A5	Q9NRA2	495 aa		7.43	□□□□□ -1.22
HCG18-238	ENST00000449544	CGGBP1	Q9UFW8	167 aa	Predicted RBP	7.43	□□□□□ -1.22
HCG18-238	ENST00000449544	METTL15	A6NJ78	407 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544		B4DXG7	233 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	CNOT4	O95628	575 aa	Known RBP	7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	NRAS	P01111	189 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	NAT2	P11245	290 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	LSM3	P62310	102 aa	Known RBP	7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	GNG3	P63215	75 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	HSD17B12	Q53GQ0	312 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	FAM209A	Q5JX71	171 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	OR6S1	Q8NH40	331 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	TMEM80	Q96HE8	168 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	SLC25A37	Q9NYZ2	338 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	KIAA1456	Q9P272	454 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	A4GNT	Q9UNA3	340 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	B9D1	Q9UPM9	204 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	MEIKIN	A0A087WXM9	373 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	LOC100130705	A0A1B0GUX0	176 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	TMEM200C	A6NKL6	621 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	SH2D1B	O14796	132 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	RGS11	O94810	467 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	HAAO	P46952	286 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	MEPCE	Q7L2J0	689 aa	Known RBP	7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	GABRG1	Q8N1C3	465 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	STARD4	Q96DR4	205 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	MNT	Q99583	582 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	GPA33	Q99795	319 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	PLEKHJ1	Q9NW61	149 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	ZNF221	Q9UK13	617 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	COPS3	Q9UNS2	423 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	HEATR5B	Q9P2D3	2071 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	IGHV3OR16-10	A0A075B7F0	116 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	ANKRD34B	A5PLL1	514 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	ONECUT2	O95948	504 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	HLA-DPB1	P04440	258 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	SLC25A16	P16260	332 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	PRKACA	P17612	351 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	GLRX	P35754	106 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	PITPNB	P48739	271 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	RBP2	P50120	134 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	ALDH3A2	P51648	485 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	LSM11	P83369	360 aa	Known RBP eCLIP	7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	MXD1	Q05195	221 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	LCN8	Q6JVE9	175 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	GPR141	Q7Z602	305 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	TMEM17	Q86X19	198 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	DMRTC2	Q8IXT2	367 aa	Predicted RBP	7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	HS3ST5	Q8IZT8	346 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	OR51T1	Q8NGJ9	327 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	PPP1R14B	Q96C90	147 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	MED30	Q96HR3	178 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	CXXC4	Q9H2H0	198 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	MCUB	Q9NWR8	336 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	OR52A1	Q9UKL2	312 aa		7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	SF3B6	Q9Y3B4	125 aa	Known RBP	7.42	□□□□□ -1.22
HCG18-238	ENST00000449544	TRGV10	A0A0A0MS01	117 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	NCBP2L	A6PVI3	153 aa	Known RBP	7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	ADAM11	O75078	769 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	DIRAS3	O95661	229 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	C21orf33	P30042	268 aa	Predicted RBP	7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	THBS4	P35443	961 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	CEACAM3	P40198	252 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	FRK	P42685	505 aa	Predicted RBP	7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	MRPL28	Q13084	256 aa	Known RBP	7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	GPR176	Q14439	515 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	ZNF57	Q68EA5	555 aa	Predicted RBP	7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	H3F3C	Q6NXT2	135 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	KCTD20	Q7Z5Y7	419 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	TSEN54	Q7Z6J9	526 aa	Known RBP	7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	SLC37A3	Q8NCC5	494 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	COQ10B	Q9H8M1	238 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	CDC42EP3	Q9UKI2	254 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	F8	P00451	2351 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	PRRC2A	P48634	2157 aa	Known RBP	7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	ZNF816-ZNF321P	A0A0X1KG74	233 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	SHC1	P29353	583 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	MRPS34	P82930	218 aa	Known RBP	7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	SPOCK1	Q08629	439 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	GALE	Q14376	348 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	DLEU7	Q6UYE1	221 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	OR51E1	Q8TCB6	317 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	RPE	Q96AT9	228 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	PSD2	Q9BQI7	771 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	SH2D2A	Q9NP31	389 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	GFOD1	Q9NXC2	390 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	ZDHHC8	Q9ULC8	765 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544		A0A087WXM4	84 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	CD300LB	A8K4G0	201 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	TMEM33	P57088	247 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	MGAT2	Q10469	447 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	FOXO1	Q12778	655 aa		7.41	□□□□□ -1.22
HCG18-238	ENST00000449544	RNF165	Q6ZSG1	346 aa		7.41	□□□□□ -1.22

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